Variant report

Variant	rs11818726
Chromosome Location	chr10:22308175-22308176
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11814448	0.91[EUR][1000 genomes]
rs12248406	0.91[EUR][1000 genomes]
rs16921947	0.90[EUR][1000 genomes]
rs55880968	0.90[EUR][1000 genomes]
rs61454417	0.90[EUR][1000 genomes]
rs66867344	0.90[EUR][1000 genomes]
rs7078177	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72797462	0.90[EUR][1000 genomes]
rs72797470	0.90[EUR][1000 genomes]
rs72797476	0.90[EUR][1000 genomes]
rs72804398	0.81[EUR][1000 genomes]
rs72806334	0.90[EUR][1000 genomes]
rs72806949	0.90[EUR][1000 genomes]
rs72806995	0.90[EUR][1000 genomes]
rs72806996	0.90[EUR][1000 genomes]
rs72807000	0.90[EUR][1000 genomes]
rs72807001	0.90[EUR][1000 genomes]
rs7912711	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831808	chr10:22187850-22357814	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22306200-22311400	Weak transcription	Monocytes-CD14+_RO01746	blood
2	chr10:22306800-22311200	Weak transcription	Primary monocytes fromperipheralblood	blood
3	chr10:22306800-22311200	Weak transcription	Stomach Mucosa	stomach
4	chr10:22306800-22311400	Weak transcription	Primary neutrophils fromperipheralblood	blood
5	chr10:22307200-22309800	Weak transcription	Fetal Lung	lung
6	chr10:22307200-22311000	Weak transcription	K562	blood
7	chr10:22307400-22309400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr10:22307800-22311600	Weak transcription	Fetal Kidney	kidney

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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