Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10501044	0.86[AFR][1000 genomes]
rs10501046	0.92[AFR][1000 genomes]
rs10501047	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10834962	1.00[AFR][1000 genomes]
rs11029515	0.92[AFR][1000 genomes]
rs11820185	0.81[AFR][1000 genomes]
rs11824431	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11826224	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11826876	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11827865	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12049824	1.00[AFR][1000 genomes]
rs12221994	1.00[AFR][1000 genomes]
rs12223352	0.86[AFR][1000 genomes]
rs12223726	1.00[AFR][1000 genomes]
rs12224038	0.92[AFR][1000 genomes]
rs16915436	0.82[AFR][1000 genomes]
rs16915437	0.81[AFR][1000 genomes]
rs16915466	1.00[AFR][1000 genomes]
rs1960495	1.00[AFR][1000 genomes]
rs60811682	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422406	chr11:26329870-26473641	Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26341800-26353200	Weak transcription	Pancreas	Pancrea
2	chr11:26349600-26349800	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr11:26349600-26350200	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr11:26349600-26350800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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