Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:61822855..61824630-chr12:62390503..62393060,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10506433	1.00[YRI][hapmap]
rs11830499	1.00[ASN][1000 genomes]
rs11831039	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11834730	1.00[YRI][hapmap]
rs11836702	1.00[YRI][hapmap]
rs11836835	1.00[YRI][hapmap]
rs11837361	1.00[ASN][1000 genomes]
rs11837364	1.00[ASN][1000 genomes]
rs11837421	0.82[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[YRI][hapmap];1.00[ASN][1000 genomes]
rs11837618	1.00[YRI][hapmap]
rs12302719	1.00[CEU][hapmap];1.00[GIH][hapmap];0.97[TSI][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17654807	1.00[YRI][hapmap]
rs17656359	1.00[YRI][hapmap]
rs17656662	1.00[YRI][hapmap]
rs17705009	1.00[YRI][hapmap]
rs17706308	1.00[YRI][hapmap]
rs17713184	1.00[YRI][hapmap]
rs3892748	1.00[YRI][hapmap]
rs73130983	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7955714	1.00[ASN][1000 genomes]
rs7956690	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7958639	1.00[ASN][1000 genomes]
rs7979256	1.00[ASN][1000 genomes]
rs7979621	1.00[ASN][1000 genomes]
rs9669548	1.00[YRI][hapmap]
rs9737799	1.00[YRI][hapmap];1.00[ASN][1000 genomes]
rs9739100	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039741	chr12:62046850-62491052	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv559151	chr12:62390768-62394361	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs11832185	R3HDM2	cis	parietal	SCAN
rs11832185	MIP	cis	parietal	SCAN

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:62386400-62392600	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr12:62387800-62392600	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr12:62390200-62391200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr12:62390600-62391000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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