Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11071444	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11071445	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11071446	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11853709	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11854967	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11856047	0.83[EUR][1000 genomes]
rs11856481	0.86[EUR][1000 genomes]
rs11857239	0.89[EUR][1000 genomes]
rs11857940	0.90[ASN][1000 genomes]
rs11858284	0.89[EUR][1000 genomes]
rs11858288	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11858794	0.90[ASN][1000 genomes]
rs56327354	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs57767828	0.83[EUR][1000 genomes]
rs59266497	0.86[EUR][1000 genomes]
rs71119480	0.89[EUR][1000 genomes]
rs7161900	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73417089	0.86[EUR][1000 genomes]
rs73418913	0.86[EUR][1000 genomes]
rs900829	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527307	chr15:59103328-60018487	Enhancers Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
2	nsv904278	chr15:59705005-59784648	Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:59736800-59785000	Weak transcription	Fetal Brain Male	brain
2	chr15:59749800-59771800	Weak transcription	Left Ventricle	heart
3	chr15:59755800-59774800	Weak transcription	A549	lung
4	chr15:59759800-59760200	Enhancers	Primary B cells from peripheral blood	blood

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