Variant report

Variant	rs11875412
Chromosome Location	chr18:8665121-8665122
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr18:8663885..8666414-chr18:8671675..8674406,2	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs12457570	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12458130	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1861950	0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34440925	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34487798	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34965651	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35737373	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs480896	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs510525	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs516586	0.93[EUR][1000 genomes]
rs526313	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs539715	0.94[ASN][1000 genomes]
rs573508	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs577048	0.96[EUR][1000 genomes]
rs58194828	0.93[EUR][1000 genomes]
rs598417	1.00[ASN][1000 genomes]
rs629299	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs629738	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs642212	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73392590	0.81[EUR][1000 genomes]
rs73392592	0.93[EUR][1000 genomes]
rs73942020	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8091166	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:8653800-8703400	Weak transcription	Right Atrium	heart
2	chr18:8658400-8665200	Weak transcription	A549	lung
3	chr18:8662200-8665200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr18:8662200-8665200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr18:8662200-8665200	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr18:8662200-8665200	Weak transcription	NH-A	brain
7	chr18:8662200-8665400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr18:8662200-8673400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr18:8662400-8665200	Weak transcription	NHDF-Ad	bronchial
10	chr18:8663400-8671800	Weak transcription	HUES64 Cell Line	embryonic stem cell
11	chr18:8663600-8665600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr18:8663800-8665400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr18:8664000-8665200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr18:8664000-8665400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
15	chr18:8664000-8665400	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr18:8664000-8665400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr18:8664000-8665400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
18	chr18:8664000-8665600	Weak transcription	H1 Cell Line	embryonic stem cell
19	chr18:8664800-8666600	Enhancers	HMEC	breast
20	chr18:8665000-8665400	Enhancers	Hela-S3	cervix
21	chr18:8665000-8665600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr18:8665000-8665800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr18:8665000-8666000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr18:8665000-8666400	Enhancers	NHEK	skin
25	chr18:8665000-8666600	Enhancers	NHLF	lung
26	chr18:8665000-8666800	Enhancers	HUVEC	blood vessel
27	chr18:8665000-8667400	Enhancers	K562	blood

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