Variant report

Variant	rs34965651
Chromosome Location	chr18:8673970-8673971
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr18:8663885..8666414-chr18:8671675..8674406,2	K562	blood:
2	chr18:8668588..8670326-chr18:8673420..8675125,2	K562	blood:
3	chr18:8613548..8616078-chr18:8673305..8676366,3	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11875412	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12457570	0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12458130	0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1861950	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34440925	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34487798	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35737373	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs480896	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs510525	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs516586	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs526313	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs539715	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs573508	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs577048	0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs58194828	0.96[EUR][1000 genomes]
rs598417	0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs629299	0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs629738	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs642212	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73392590	0.84[EUR][1000 genomes]
rs73392592	0.96[EUR][1000 genomes]
rs73942020	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8091166	0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:8653800-8703400	Weak transcription	Right Atrium	heart
2	chr18:8669600-8674000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr18:8671800-8674600	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr18:8672200-8674600	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr18:8672600-8674000	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr18:8672600-8674600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr18:8673000-8674000	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr18:8673000-8674000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr18:8673000-8674200	Enhancers	Primary B cells from peripheral blood	blood
10	chr18:8673400-8674200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr18:8673400-8674400	Enhancers	ES-I3 Cell Line	embryonic stem cell
12	chr18:8673600-8674200	Flanking Active TSS	A549	lung
13	chr18:8673600-8674200	Enhancers	NHLF	lung
14	chr18:8673800-8674200	Active TSS	Duodenum Mucosa	Duodenum
15	chr18:8673800-8674200	Active TSS	Rectal Mucosa Donor 29	rectum
16	chr18:8673800-8674200	Flanking Active TSS	GM12878-XiMat	blood
17	chr18:8673800-8674400	Enhancers	HUES6 Cell Line	embryonic stem cell

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