Variant report

Variant	rs11885317
Chromosome Location	chr2:74100954-74100955
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:74097431..74099380-chr2:74100945..74102785,2	K562	blood:
2	chr2:74097880..74100787-chr2:74100945..74103812,3	K562	blood:

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10519327	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11126420	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11886615	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17009428	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs33990056	0.86[ASN][1000 genomes]
rs3738846	0.88[ASN][1000 genomes]
rs57394861	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61091264	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6726010	0.88[ASN][1000 genomes]
rs6737597	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9309477	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9808106	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9808471	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]

No data

Chromatin state (count:59 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:74078200-74101000	Weak transcription	Small Intestine	intestine
2	chr2:74092000-74101800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr2:74092800-74104600	Weak transcription	Hela-S3	cervix
4	chr2:74093400-74102200	Weak transcription	Psoas Muscle	Psoas
5	chr2:74093800-74101800	Weak transcription	HepG2	liver
6	chr2:74094000-74102000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr2:74094200-74101000	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr2:74094200-74101000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr2:74094200-74101000	Weak transcription	Ovary	ovary
10	chr2:74094200-74101200	Weak transcription	Thymus	Thymus
11	chr2:74094200-74101400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr2:74094200-74101400	Weak transcription	Lung	lung
13	chr2:74094200-74101600	Weak transcription	Primary B cells from cord blood	blood
14	chr2:74094200-74101600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
15	chr2:74094200-74103400	Weak transcription	Fetal Thymus	thymus
16	chr2:74094200-74104000	Weak transcription	NHEK	skin
17	chr2:74094200-74104200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr2:74094200-74104400	Weak transcription	K562	blood
19	chr2:74094200-74104600	Weak transcription	Duodenum Mucosa	Duodenum
20	chr2:74094400-74101000	Weak transcription	Primary T cells fromperipheralblood	blood
21	chr2:74094400-74101000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr2:74094400-74101000	Weak transcription	Dnd41	blood
23	chr2:74094400-74103000	Weak transcription	Primary B cells from peripheral blood	blood
24	chr2:74094400-74103800	Weak transcription	Monocytes-CD14+_RO01746	blood
25	chr2:74094400-74104000	Weak transcription	Primary monocytes fromperipheralblood	blood
26	chr2:74094400-74104200	Weak transcription	Primary neutrophils fromperipheralblood	blood
27	chr2:74094400-74104600	Weak transcription	Rectal Mucosa Donor 29	rectum
28	chr2:74094600-74101000	Weak transcription	Fetal Intestine Small	intestine
29	chr2:74094600-74101200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
30	chr2:74094800-74104600	Weak transcription	GM12878-XiMat	blood
31	chr2:74097600-74101000	Weak transcription	Brain Angular Gyrus	brain
32	chr2:74097600-74101200	Weak transcription	Skeletal Muscle Female	skeletal muscle
33	chr2:74097600-74102600	Weak transcription	Brain Hippocampus Middle	brain
34	chr2:74097600-74114600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr2:74097800-74104200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr2:74098000-74101400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
37	chr2:74098000-74101800	Weak transcription	Primary T cells from cord blood	blood
38	chr2:74098000-74101800	Weak transcription	Osteobl	bone
39	chr2:74098000-74102200	Weak transcription	NH-A	brain
40	chr2:74098000-74103200	Weak transcription	Placenta	Placenta
41	chr2:74098000-74104000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr2:74098000-74104200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr2:74098000-74104600	Weak transcription	Rectal Mucosa Donor 31	rectum
44	chr2:74098400-74104200	Weak transcription	Fetal Muscle Leg	muscle
45	chr2:74098600-74102000	Weak transcription	Fetal Stomach	stomach
46	chr2:74099200-74101000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
47	chr2:74099600-74101800	Weak transcription	Brain Cingulate Gyrus	brain
48	chr2:74099800-74101600	Weak transcription	Liver	Liver
49	chr2:74099800-74103400	Weak transcription	Placenta Amnion	Placenta Amnion
50	chr2:74099800-74104000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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