Variant report

Variant	rs6737597
Chromosome Location	chr2:74108998-74108999
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:74107424..74109994-chr2:74373553..74377122,3	K562	blood:
2	chr2:74107770..74109994-chr2:74374707..74377122,2	K562	blood:

Variant related genes	Relation type
ENSG00000163170	Chromatin interaction
ENSG00000225439	Chromatin interaction

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs1036113	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs10519327	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11126420	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11885317	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11886615	0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13387647	0.81[CHB][hapmap];0.83[ASN][1000 genomes]
rs13397133	0.81[CEU][hapmap];0.90[CHB][hapmap];0.82[JPT][hapmap]
rs17009417	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs17009421	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs17009424	0.91[CHB][hapmap]
rs17009428	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17009429	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs17009430	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs17009433	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs17009436	0.91[CHB][hapmap]
rs2070581	0.80[CHB][hapmap]
rs2163539	0.86[CHB][hapmap];0.82[JPT][hapmap]
rs2303987	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs33990056	0.96[ASN][1000 genomes]
rs3738846	0.95[CHB][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs3813229	0.80[CHB][hapmap];0.86[JPT][hapmap]
rs3813232	0.80[CHB][hapmap]
rs4852983	0.80[CHB][hapmap];0.86[JPT][hapmap]
rs56383013	0.86[ASN][1000 genomes]
rs56801363	0.87[ASN][1000 genomes]
rs57394861	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61091264	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6546875	0.87[CHB][hapmap];0.95[JPT][hapmap]
rs6726010	0.95[CHB][hapmap];0.91[JPT][hapmap];0.91[ASN][1000 genomes]
rs7594485	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs7606408	0.88[ASN][1000 genomes]
rs9309477	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9808106	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9808471	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:74097600-74114600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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