Variant report

Variant	rs11894806
Chromosome Location	chr2:86029107-86029108
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:85986182..85989122-chr2:86027454..86030247,2	MCF-7	breast:
2	chr2:86020913..86022569-chr2:86028373..86031162,2	K562	blood:
3	chr2:86001369..86004244-chr2:86027552..86029124,2	MCF-7	breast:
4	chr2:85863132..85864782-chr2:86027607..86030371,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000168883	Chromatin interaction
ENSG00000168874	Chromatin interaction

rs_ID	r²[population]
rs34853189	1.00[AMR][1000 genomes]
rs57318396	1.00[AMR][1000 genomes]
rs58926604	1.00[AMR][1000 genomes]
rs59598725	1.00[AMR][1000 genomes]
rs61371265	1.00[AMR][1000 genomes]
rs6547652	1.00[AMR][1000 genomes]
rs6759624	1.00[AMR][1000 genomes]
rs6760097	1.00[AMR][1000 genomes]
rs6760112	1.00[AMR][1000 genomes]

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:86022400-86033800	Weak transcription	Gastric	stomach
2	chr2:86023000-86033800	Weak transcription	Pancreas	Pancrea
3	chr2:86024400-86037400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr2:86024400-86037600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr2:86024600-86043600	Weak transcription	Right Ventricle	heart
6	chr2:86024800-86030200	Weak transcription	Brain Substantia Nigra	brain
7	chr2:86024800-86038000	Weak transcription	Ovary	ovary
8	chr2:86025400-86031600	Weak transcription	HSMM	muscle
9	chr2:86025400-86037600	Weak transcription	Right Atrium	heart
10	chr2:86026800-86029600	Weak transcription	Psoas Muscle	Psoas
11	chr2:86026800-86029800	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr2:86027000-86029800	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr2:86027000-86038000	Weak transcription	Left Ventricle	heart
14	chr2:86027200-86037600	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr2:86028000-86029200	Weak transcription	Hela-S3	cervix
16	chr2:86028200-86030000	ZNF genes & repeats	Aorta	Aorta
17	chr2:86028200-86031000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr2:86028600-86029600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr2:86028600-86031600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr2:86028600-86037200	Weak transcription	Fetal Lung	lung
21	chr2:86028800-86029200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr2:86028800-86039000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr2:86029000-86040800	Weak transcription	Brain Hippocampus Middle	brain

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