Variant report

Variant	rs6760097
Chromosome Location	chr2:86202183-86202184
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11894806	1.00[AMR][1000 genomes]
rs34853189	1.00[AMR][1000 genomes]
rs57318396	1.00[AMR][1000 genomes]
rs58926604	1.00[AMR][1000 genomes]
rs59598725	1.00[AMR][1000 genomes]
rs61371265	1.00[AMR][1000 genomes]
rs6547652	1.00[AMR][1000 genomes]
rs6759624	1.00[AMR][1000 genomes]
rs6760112	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1001104	chr2:86182021-86271923	Enhancers Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv535807	chr2:86182021-86271923	Strong transcription Enhancers Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:86198200-86202800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr2:86199000-86202400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr2:86201600-86202200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr2:86201800-86202600	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr2:86201800-86203000	Enhancers	Lung	lung
6	chr2:86201800-86204000	Enhancers	Left Ventricle	heart
7	chr2:86201800-86204200	Enhancers	Fetal Muscle Leg	muscle
8	chr2:86202000-86202800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr2:86202000-86203200	Weak transcription	Fetal Lung	lung
10	chr2:86202000-86204000	Enhancers	Gastric	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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