The 2.0 version of rSNPBase

Variant report

Variant rs11898168
Chromosome Location chr2:231296697-231296698
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231283600-231309200 Weak transcription Stomach Smooth Muscle stomach
2 chr2:231284200-231301000 Weak transcription Rectal Smooth Muscle rectum
3 chr2:231284200-231304000 Weak transcription NH-A brain
4 chr2:231284600-231306200 Weak transcription HMEC breast
5 chr2:231288800-231319000 Weak transcription Fetal Kidney kidney
6 chr2:231288800-231356000 Weak transcription Stomach Mucosa stomach
7 chr2:231289000-231299400 Weak transcription NHLF lung
8 chr2:231289000-231309200 Weak transcription Aorta Aorta
9 chr2:231291200-231299600 Weak transcription NHEK skin
10 chr2:231292400-231298400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr2:231292600-231298800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr2:231294000-231299200 Weak transcription NHDF-Ad bronchial
13 chr2:231294000-231300400 Weak transcription HUVEC blood vessel
14 chr2:231294000-231301200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr2:231294200-231309600 Weak transcription Placenta Amnion Placenta Amnion
16 chr2:231294200-231311600 Weak transcription Colon Smooth Muscle Colon
17 chr2:231294600-231297400 Genic enhancers Primary B cells from cord blood blood
18 chr2:231294600-231298200 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr2:231294600-231298400 Genic enhancers Primary T helper cells PMA-I stimulated --
20 chr2:231294600-231299400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr2:231294800-231296800 Genic enhancers Primary B cells from peripheral blood blood
22 chr2:231294800-231296800 Genic enhancers Primary T regulatory cells fromperipheralblood blood
23 chr2:231294800-231296800 Genic enhancers Monocytes-CD14+_RO01746 blood
24 chr2:231294800-231298000 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr2:231294800-231299800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
26 chr2:231295000-231297200 Enhancers Primary T helper cells fromperipheralblood blood
27 chr2:231295200-231297000 Enhancers Primary T killer memory cells from peripheral blood blood
28 chr2:231295200-231297400 Strong transcription Primary hematopoietic stem cells blood
29 chr2:231295200-231297800 Weak transcription Fetal Lung lung
30 chr2:231295200-231301000 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr2:231295200-231309200 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr2:231295400-231296800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr2:231295400-231297600 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr2:231295400-231299200 Weak transcription Osteobl bone
35 chr2:231295400-231300800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr2:231295400-231306400 Weak transcription HSMM muscle
37 chr2:231295600-231296800 Enhancers Primary T helper 17 cells PMA-I stimulated --
38 chr2:231295600-231297000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr2:231295600-231297200 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr2:231295600-231297600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr2:231295600-231299800 Weak transcription Muscle Satellite Cultured Cells --
42 chr2:231295600-231301000 Weak transcription Placenta Placenta
43 chr2:231295800-231297600 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr2:231295800-231307800 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr2:231295800-231309000 Weak transcription Small Intestine intestine
46 chr2:231296000-231296800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr2:231296000-231300200 Weak transcription Liver Liver
48 chr2:231296000-231300400 Weak transcription Pancreas Pancrea
49 chr2:231296000-231300400 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr2:231296000-231309400 Weak transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015