The 2.0 version of rSNPBase

Variant report

Variant rs6436937
Chromosome Location chr2:231297271-231297272
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231283600-231309200 Weak transcription Stomach Smooth Muscle stomach
2 chr2:231284200-231301000 Weak transcription Rectal Smooth Muscle rectum
3 chr2:231284200-231304000 Weak transcription NH-A brain
4 chr2:231284600-231306200 Weak transcription HMEC breast
5 chr2:231288800-231319000 Weak transcription Fetal Kidney kidney
6 chr2:231288800-231356000 Weak transcription Stomach Mucosa stomach
7 chr2:231289000-231299400 Weak transcription NHLF lung
8 chr2:231289000-231309200 Weak transcription Aorta Aorta
9 chr2:231291200-231299600 Weak transcription NHEK skin
10 chr2:231292400-231298400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr2:231292600-231298800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr2:231294000-231299200 Weak transcription NHDF-Ad bronchial
13 chr2:231294000-231300400 Weak transcription HUVEC blood vessel
14 chr2:231294000-231301200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr2:231294200-231309600 Weak transcription Placenta Amnion Placenta Amnion
16 chr2:231294200-231311600 Weak transcription Colon Smooth Muscle Colon
17 chr2:231294600-231297400 Genic enhancers Primary B cells from cord blood blood
18 chr2:231294600-231298200 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr2:231294600-231298400 Genic enhancers Primary T helper cells PMA-I stimulated --
20 chr2:231294600-231299400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr2:231294800-231298000 Enhancers Primary T killer naive cells fromperipheralblood blood
22 chr2:231294800-231299800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr2:231295200-231297400 Strong transcription Primary hematopoietic stem cells blood
24 chr2:231295200-231297800 Weak transcription Fetal Lung lung
25 chr2:231295200-231301000 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr2:231295200-231309200 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr2:231295400-231297600 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr2:231295400-231299200 Weak transcription Osteobl bone
29 chr2:231295400-231300800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr2:231295400-231306400 Weak transcription HSMM muscle
31 chr2:231295600-231297600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr2:231295600-231299800 Weak transcription Muscle Satellite Cultured Cells --
33 chr2:231295600-231301000 Weak transcription Placenta Placenta
34 chr2:231295800-231297600 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr2:231295800-231307800 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr2:231295800-231309000 Weak transcription Small Intestine intestine
37 chr2:231296000-231300200 Weak transcription Liver Liver
38 chr2:231296000-231300400 Weak transcription Pancreas Pancrea
39 chr2:231296000-231300400 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr2:231296000-231309400 Weak transcription Colonic Mucosa Colon
41 chr2:231296000-231310400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr2:231296200-231297600 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr2:231296200-231298000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr2:231296200-231300200 Weak transcription Fetal Thymus thymus
45 chr2:231296200-231300400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr2:231296200-231300400 Weak transcription Fetal Intestine Small intestine
47 chr2:231296200-231300400 Weak transcription Left Ventricle heart
48 chr2:231296200-231300400 Weak transcription Thymus Thymus
49 chr2:231296200-231301200 Weak transcription Lung lung
50 chr2:231296200-231301200 Weak transcription Ovary ovary

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Last update: Aug 31, 2015