The 2.0 version of rSNPBase

Variant report

Variant rs6730329
Chromosome Location chr2:231303043-231303044
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231283600-231309200 Weak transcription Stomach Smooth Muscle stomach
2 chr2:231284200-231304000 Weak transcription NH-A brain
3 chr2:231284600-231306200 Weak transcription HMEC breast
4 chr2:231288800-231319000 Weak transcription Fetal Kidney kidney
5 chr2:231288800-231356000 Weak transcription Stomach Mucosa stomach
6 chr2:231289000-231309200 Weak transcription Aorta Aorta
7 chr2:231294200-231309600 Weak transcription Placenta Amnion Placenta Amnion
8 chr2:231294200-231311600 Weak transcription Colon Smooth Muscle Colon
9 chr2:231295200-231309200 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr2:231295400-231306400 Weak transcription HSMM muscle
11 chr2:231295800-231307800 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr2:231295800-231309000 Weak transcription Small Intestine intestine
13 chr2:231296000-231309400 Weak transcription Colonic Mucosa Colon
14 chr2:231296000-231310400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr2:231296200-231308400 Weak transcription Gastric stomach
16 chr2:231296200-231309200 Weak transcription Fetal Stomach stomach
17 chr2:231296200-231309200 Weak transcription Spleen Spleen
18 chr2:231296400-231307600 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr2:231296600-231303800 ZNF genes & repeats GM12878-XiMat blood
20 chr2:231299600-231308200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr2:231299800-231306000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr2:231300200-231303600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
23 chr2:231300200-231304000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr2:231300400-231304400 Weak transcription Muscle Satellite Cultured Cells --
25 chr2:231300400-231304400 Weak transcription NHEK skin
26 chr2:231300600-231304000 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr2:231301200-231303600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr2:231301400-231303600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr2:231301400-231303800 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr2:231301400-231304000 Weak transcription Primary hematopoietic stem cells blood
31 chr2:231301400-231304000 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr2:231301400-231304000 Weak transcription HUVEC blood vessel
33 chr2:231301400-231306000 Weak transcription Thymus Thymus
34 chr2:231301400-231306200 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr2:231301400-231307600 Weak transcription Fetal Muscle Leg muscle
36 chr2:231301400-231307600 Weak transcription Fetal Thymus thymus
37 chr2:231301400-231307600 Weak transcription Left Ventricle heart
38 chr2:231301400-231307800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr2:231301400-231308400 Weak transcription Rectal Smooth Muscle rectum
40 chr2:231301400-231309200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr2:231301400-231309200 Weak transcription Lung lung
42 chr2:231301400-231309200 Weak transcription Ovary ovary
43 chr2:231301400-231309200 Weak transcription Pancreas Pancrea
44 chr2:231301400-231314400 Weak transcription Psoas Muscle Psoas
45 chr2:231301600-231307600 Weak transcription Primary T cells fromperipheralblood blood
46 chr2:231301800-231303200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr2:231301800-231303200 Strong transcription Primary B cells from cord blood blood
48 chr2:231301800-231303200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr2:231301800-231303400 Strong transcription Primary T helper cells PMA-I stimulated --
50 chr2:231301800-231303600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015