Variant report

Variant	rs11962157
Chromosome Location	chr6:11954798-11954799
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:11954299..11955841-chr6:12011068..12013010,2	K562	blood:
2	chr6:11947439..11949235-chr6:11953867..11956602,2	K562	blood:
3	chr6:11951766..11953426-chr6:11954045..11956144,3	K562	blood:
4	chr6:11952838..11955991-chr6:12007401..12009737,3	K562	blood:
5	chr6:11943872..11945567-chr6:11954478..11956491,2	K562	blood:

Variant related genes	Relation type
ENSG00000229896	Chromatin interaction
ENSG00000095951	Chromatin interaction

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs11756601	0.86[ASN][1000 genomes]
rs11964096	0.86[ASN][1000 genomes]
rs11965341	0.83[ASN][1000 genomes]
rs11966682	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11968174	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11968421	0.86[ASN][1000 genomes]
rs1205846	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1205852	0.84[ASN][1000 genomes]
rs1205853	0.84[ASN][1000 genomes]
rs1205854	0.84[ASN][1000 genomes]
rs1205855	0.84[ASN][1000 genomes]
rs1205856	0.84[ASN][1000 genomes]
rs1205857	0.84[ASN][1000 genomes]
rs1205859	0.84[ASN][1000 genomes]
rs1205860	0.84[ASN][1000 genomes]
rs1205861	0.84[ASN][1000 genomes]
rs1205863	0.84[ASN][1000 genomes]
rs1205864	0.84[ASN][1000 genomes]
rs1205865	0.84[ASN][1000 genomes]
rs1205866	0.84[ASN][1000 genomes]
rs1205867	0.84[ASN][1000 genomes]
rs1205871	0.84[ASN][1000 genomes]
rs1205872	0.84[ASN][1000 genomes]
rs1205873	0.84[ASN][1000 genomes]
rs1205875	0.84[ASN][1000 genomes]
rs1205876	0.84[ASN][1000 genomes]
rs1205877	0.84[ASN][1000 genomes]
rs1205879	0.84[ASN][1000 genomes]
rs1205880	0.84[ASN][1000 genomes]
rs1205881	0.84[ASN][1000 genomes]
rs1205882	0.84[ASN][1000 genomes]
rs1205883	0.84[ASN][1000 genomes]
rs1205884	0.84[ASN][1000 genomes]
rs1205887	0.84[ASN][1000 genomes]
rs1205888	0.84[ASN][1000 genomes]
rs1205889	0.84[ASN][1000 genomes]
rs1205890	0.84[ASN][1000 genomes]
rs1205891	0.84[ASN][1000 genomes]
rs13214096	0.81[ASN][1000 genomes]
rs16872095	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16872104	0.86[ASN][1000 genomes]
rs209812	0.86[ASN][1000 genomes]
rs209813	0.86[ASN][1000 genomes]
rs209814	0.84[ASN][1000 genomes]
rs209815	0.84[ASN][1000 genomes]
rs209816	0.84[ASN][1000 genomes]
rs55968946	0.84[ASN][1000 genomes]
rs58311216	0.86[ASN][1000 genomes]
rs59552060	0.86[ASN][1000 genomes]
rs62395404	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62395407	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62395428	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs714493	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7740251	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs864245	0.84[ASN][1000 genomes]
rs960414	0.84[ASN][1000 genomes]
rs999823	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs999824	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11954400-11954800	Weak transcription	K562	blood

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