Variant report
Variant | rs11969028 |
---|---|
Chromosome Location | chr6:120967087-120967088 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10457397 | 0.98[ASN][1000 genomes] |
rs10499098 | 0.84[EUR][1000 genomes] |
rs11153944 | 0.94[ASN][1000 genomes] |
rs11961543 | 0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs11965399 | 0.81[EUR][1000 genomes] |
rs11967874 | 0.84[EUR][1000 genomes] |
rs11970527 | 0.83[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs12661436 | 0.84[EUR][1000 genomes] |
rs12663612 | 0.84[AFR][1000 genomes] |
rs12665301 | 0.91[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs17082730 | 0.84[EUR][1000 genomes] |
rs17082740 | 0.84[EUR][1000 genomes] |
rs2358048 | 0.90[EUR][1000 genomes] |
rs4574687 | 0.91[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs55908530 | 0.84[EUR][1000 genomes] |
rs6933679 | 0.90[EUR][1000 genomes] |
rs72956032 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes] |
rs72968094 | 0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs72969940 | 0.84[EUR][1000 genomes] |
rs72969948 | 0.81[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv2753290 | chr6:120309301-120979301 | Enhancers Weak transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS | TF binding regionChromatin interactive regionlncRNAmiRNA | 5 gene(s) | inside rSNPs | diseases |
2 | esv2752474 | chr6:120309301-120982301 | Enhancers ZNF genes & repeats Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS | TF binding regionChromatin interactive regionlncRNAmiRNA | 5 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:120966600-120968600 | Enhancers | Fetal Lung | lung |