The 2.0 version of rSNPBase

Variant report

Variant rs11999015
Chromosome Location chr9:26942716-26942717
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:26916800-26945200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr9:26925800-26945200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr9:26926000-26945200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr9:26926000-26945200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr9:26926000-26945400 Weak transcription HSMMtube muscle
6 chr9:26926600-26944200 Weak transcription NHEK skin
7 chr9:26926600-26945600 Weak transcription Fetal Kidney kidney
8 chr9:26927400-26943800 Weak transcription Pancreas Pancrea
9 chr9:26927400-26945600 Weak transcription Fetal Thymus thymus
10 chr9:26927800-26945600 Weak transcription Colonic Mucosa Colon
11 chr9:26928400-26945200 Weak transcription Muscle Satellite Cultured Cells --
12 chr9:26928400-26945400 Weak transcription NH-A brain
13 chr9:26928600-26943600 Weak transcription NHLF lung
14 chr9:26928600-26945000 Weak transcription Osteobl bone
15 chr9:26928600-26945600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr9:26928800-26943800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr9:26928800-26944400 Weak transcription Rectal Smooth Muscle rectum
18 chr9:26928800-26944600 Weak transcription HMEC breast
19 chr9:26932400-26945400 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr9:26935200-26943000 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr9:26935200-26945400 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr9:26936400-26945400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr9:26936600-26944200 Weak transcription Liver Liver
24 chr9:26936800-26943200 Weak transcription Ovary ovary
25 chr9:26936800-26943200 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr9:26936800-26944000 Weak transcription Brain Angular Gyrus brain
27 chr9:26936800-26944600 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr9:26936800-26945200 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr9:26936800-26945200 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr9:26936800-26945400 Weak transcription H1 Cell Line embryonic stem cell
31 chr9:26936800-26945600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr9:26936800-26945600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr9:26936800-26945600 Weak transcription Aorta Aorta
34 chr9:26937200-26945200 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr9:26938000-26944000 Weak transcription Colon Smooth Muscle Colon
36 chr9:26938200-26944600 Weak transcription Brain Anterior Caudate brain
37 chr9:26938400-26944000 Weak transcription HSMM muscle
38 chr9:26938400-26945200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr9:26938400-26945200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr9:26938400-26945400 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr9:26938400-26945400 Weak transcription Fetal Lung lung
42 chr9:26938400-26945600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr9:26938600-26943200 Weak transcription Primary B cells from cord blood blood
44 chr9:26938600-26943200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr9:26938600-26943200 Weak transcription Psoas Muscle Psoas
46 chr9:26938600-26943600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr9:26938600-26943800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr9:26938600-26945400 Weak transcription Fetal Intestine Small intestine
49 chr9:26938600-26945600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr9:26938600-26945600 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015