Variant report

Variant	rs12016861
Chromosome Location	chr13:110475853-110475854
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs1023305	0.85[AFR][1000 genomes]
rs1023306	0.85[AFR][1000 genomes]
rs10454514	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10454541	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10454542	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12583717	1.00[ASN][1000 genomes]
rs12584954	0.81[ASN][1000 genomes]
rs12585507	0.85[ASN][1000 genomes]
rs12586001	0.83[EUR][1000 genomes]
rs1335611	0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs168057	0.88[ASN][1000 genomes]
rs336234	0.83[EUR][1000 genomes]
rs3803239	0.86[ASN][1000 genomes]
rs57965758	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58769110	0.83[EUR][1000 genomes]
rs60260995	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60407269	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60666848	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60710406	1.00[ASN][1000 genomes]
rs7318695	0.92[AFR][1000 genomes]
rs7333538	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7338690	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73608761	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73608768	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7982658	0.85[AFR][1000 genomes]
rs7983073	0.85[AFR][1000 genomes]
rs7984046	0.85[AFR][1000 genomes]
rs7986269	0.87[AFR][1000 genomes]
rs7986378	0.87[AFR][1000 genomes]
rs7986897	0.83[AFR][1000 genomes]
rs7994334	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7998532	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7999530	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9583430	0.85[AFR][1000 genomes]
rs9583431	0.85[AFR][1000 genomes]
rs9587991	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9587993	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9587995	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9587999	0.87[AFR][1000 genomes]
rs9588000	0.87[AFR][1000 genomes]
rs9588001	0.85[AFR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:110471200-110476200	Weak transcription	HSMM	muscle
2	chr13:110473800-110489200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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