Variant report
| Variant | rs9587999 |
|---|---|
| Chromosome Location | chr13:110484751-110484752 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:40)
| rs_ID | r2[population] |
|---|---|
| rs1023305 | 0.88[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs1023306 | 0.88[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs12016861 | 0.87[AFR][1000 genomes] |
| rs12184672 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs1335612 | 1.00[EUR][1000 genomes] |
| rs1335613 | 1.00[EUR][1000 genomes] |
| rs1967912 | 1.00[EUR][1000 genomes] |
| rs7317464 | 1.00[EUR][1000 genomes] |
| rs7317502 | 1.00[EUR][1000 genomes] |
| rs7317716 | 1.00[EUR][1000 genomes] |
| rs7318695 | 0.80[AFR][1000 genomes] |
| rs7331580 | 1.00[EUR][1000 genomes] |
| rs7332843 | 1.00[EUR][1000 genomes] |
| rs7358932 | 1.00[EUR][1000 genomes] |
| rs7358936 | 1.00[EUR][1000 genomes] |
| rs7358951 | 1.00[EUR][1000 genomes] |
| rs73608783 | 1.00[EUR][1000 genomes] |
| rs7982658 | 0.88[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7983073 | 0.88[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7984046 | 0.88[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7986269 | 0.84[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7986378 | 0.84[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7986897 | 1.00[EUR][1000 genomes] |
| rs7989371 | 1.00[EUR][1000 genomes] |
| rs7990525 | 1.00[EUR][1000 genomes] |
| rs7997262 | 1.00[EUR][1000 genomes] |
| rs7999146 | 1.00[EUR][1000 genomes] |
| rs8002388 | 1.00[EUR][1000 genomes] |
| rs9301413 | 1.00[EUR][1000 genomes] |
| rs9583429 | 1.00[EUR][1000 genomes] |
| rs9583430 | 0.88[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs9583431 | 0.88[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs9587996 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs9588000 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs9588001 | 0.88[AFR][1000 genomes] |
| rs9588002 | 1.00[EUR][1000 genomes] |
| rs9588003 | 1.00[EUR][1000 genomes] |
| rs9588004 | 1.00[EUR][1000 genomes] |
| rs9588005 | 1.00[EUR][1000 genomes] |
| rs9588007 | 1.00[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr13:110473800-110489200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
