Variant report

Variant	rs12031337
Chromosome Location	chr1:214446481-214446482
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11120286	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12039689	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12407415	0.84[ASN][1000 genomes]
rs12724396	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12754081	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12755490	0.84[ASN][1000 genomes]
rs2067945	0.84[ASN][1000 genomes]
rs2119336	0.86[ASN][1000 genomes]
rs34103218	0.84[ASN][1000 genomes]
rs34161369	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34244779	0.84[ASN][1000 genomes]
rs34960781	0.84[ASN][1000 genomes]
rs35812257	0.94[AMR][1000 genomes]
rs35843830	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36038181	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs985853	0.96[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:214437400-214453200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr1:214444200-214446800	Enhancers	Fetal Heart	heart
3	chr1:214445000-214453200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr1:214445200-214453000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr1:214445200-214453200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr1:214445600-214450600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr1:214445600-214453200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr1:214445600-214453200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr1:214445600-214453400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr1:214445800-214450400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr1:214445800-214453000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr1:214445800-214453200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr1:214445800-214453200	Weak transcription	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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