Variant report

Variant	rs2119336
Chromosome Location	chr1:214430869-214430870
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11120286	0.86[ASN][1000 genomes]
rs12031337	0.86[ASN][1000 genomes]
rs12039689	0.86[ASN][1000 genomes]
rs12407415	0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12724396	0.84[ASN][1000 genomes]
rs12754081	0.86[ASN][1000 genomes]
rs12755490	0.89[CEU][hapmap];1.00[CHB][hapmap];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2067945	0.89[CEU][hapmap];1.00[CHB][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34103218	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34161369	0.86[ASN][1000 genomes]
rs34244779	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34960781	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35843830	0.86[ASN][1000 genomes]
rs36038181	0.86[ASN][1000 genomes]
rs985853	0.85[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:214417800-214432800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr1:214429200-214432800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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