Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11209352	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11579356	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11801277	0.87[EUR][1000 genomes]
rs12065097	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12075697	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12082973	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12088265	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12090652	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1492057	0.82[EUR][1000 genomes]
rs1492074	0.88[ASN][1000 genomes]
rs17435073	0.96[ASN][1000 genomes]
rs699229	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72680408	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7414744	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs854260	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs854270	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs854271	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs854286	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs854287	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9887767	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9887801	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9988609	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527722	chr1:69212053-69323222	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:69280400-69285000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr1:69281000-69285400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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