Variant report

Variant rs12060076
Chromosome Location chr1:173500292-173500293
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173496400-173501200 Enhancers HUES6 Cell Line embryonic stem cell
2 chr1:173496400-173501800 Enhancers Cortex derived primary cultured neurospheres brain
3 chr1:173496800-173500400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:173496800-173501200 Enhancers ES-I3 Cell Line embryonic stem cell
5 chr1:173496800-173501600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr1:173497000-173500400 Weak transcription Adipose Nuclei Adipose
7 chr1:173497200-173500400 Weak transcription H9 Cell Line embryonic stem cell
8 chr1:173497400-173500400 Weak transcription Brain Substantia Nigra brain
9 chr1:173497600-173500400 Weak transcription H1 Cell Line embryonic stem cell
10 chr1:173498600-173501000 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr1:173498600-173501400 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr1:173498800-173501000 Enhancers iPS-18 Cell Line embryonic stem cell
13 chr1:173498800-173501000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr1:173499000-173501600 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr1:173499200-173500800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:173499200-173501400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr1:173499400-173501200 Enhancers HUES64 Cell Line embryonic stem cell
18 chr1:173499400-173501200 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr1:173499600-173501000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:173499800-173500600 Enhancers Rectal Smooth Muscle rectum
21 chr1:173499800-173500600 Enhancers HSMMtube muscle
22 chr1:173499800-173500800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
23 chr1:173499800-173500800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:173499800-173501000 Enhancers HUES48 Cell Line embryonic stem cell
25 chr1:173499800-173501200 Enhancers iPS-15b Cell Line embryonic stem cell
26 chr1:173499800-173501400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:173500000-173500600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:173500000-173500800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:173500000-173500800 Enhancers Brain Germinal Matrix brain
30 chr1:173500000-173501400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr1:173500000-173501600 Enhancers iPS-20b Cell Line embryonic stem cell
32 chr1:173500000-173501600 Enhancers Primary T helper naive cells from peripheral blood blood
33 chr1:173500000-173501600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:173500000-173501600 Enhancers Colon Smooth Muscle Colon
35 chr1:173500200-173500600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr1:173500200-173500600 Enhancers Brain Cingulate Gyrus brain
37 chr1:173500200-173500600 Enhancers Fetal Brain Male brain
38 chr1:173500200-173500600 Enhancers Fetal Brain Female brain
39 chr1:173500200-173500800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr1:173500200-173501000 Flanking Active TSS Brain Anterior Caudate brain

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