Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:173485631..173487913-chr1:173488725..173492186,3	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10912620	0.82[MKK][hapmap]
rs10912627	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10912640	1.00[EUR][1000 genomes]
rs12060076	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12060658	0.81[ASW][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];0.95[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12077267	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12078424	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12078577	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12079750	0.81[YRI][hapmap]
rs12080868	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12081730	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12082116	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12085144	0.83[AMR][1000 genomes]
rs12091134	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1461015	1.00[EUR][1000 genomes]
rs16846052	0.85[MEX][hapmap]
rs16846131	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16846220	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs2901746	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6660804	0.81[LWK][hapmap]
rs6664925	1.00[EUR][1000 genomes]
rs74129110	1.00[EUR][1000 genomes]
rs7529099	1.00[EUR][1000 genomes]
rs7551131	1.00[EUR][1000 genomes]
rs912767	0.82[LWK][hapmap]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:173488000-173489600	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr1:173488400-173490200	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr1:173488400-173490800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr1:173488400-173495200	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr1:173488400-173496000	Weak transcription	Right Atrium	heart
6	chr1:173488400-173496800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr1:173488600-173489800	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr1:173488600-173490000	Weak transcription	iPS-18 Cell Line	embryonic stem cell

Quick Search: