The 2.0 version of rSNPBase

Variant report

Variant rs12071533
Chromosome Location chr1:168472159-168472160
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:168454600-168475200 Weak transcription Small Intestine intestine
2 chr1:168462000-168473400 Weak transcription Pancreas Pancrea
3 chr1:168462800-168473600 Weak transcription Psoas Muscle Psoas
4 chr1:168465800-168473400 Weak transcription Liver Liver
5 chr1:168467800-168473000 Weak transcription Primary hematopoietic stem cells blood
6 chr1:168467800-168475200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr1:168468000-168473600 Weak transcription NHLF lung
8 chr1:168468200-168473400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr1:168468200-168476400 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr1:168468400-168472800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr1:168468400-168473400 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr1:168468600-168472800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:168468600-168472800 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr1:168468800-168473800 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr1:168468800-168478600 Weak transcription HepG2 liver
16 chr1:168469200-168472400 Weak transcription NHDF-Ad bronchial
17 chr1:168469200-168476800 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:168469400-168472400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:168469400-168473000 Weak transcription Hela-S3 cervix
20 chr1:168469400-168473000 Weak transcription Osteobl bone
21 chr1:168469400-168475400 Weak transcription A549 lung
22 chr1:168469600-168473000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:168469600-168473200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:168469800-168473200 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:168469800-168473600 Weak transcription Fetal Intestine Large intestine
26 chr1:168470000-168475600 Enhancers Primary monocytes fromperipheralblood blood
27 chr1:168470200-168474800 Enhancers Primary hematopoietic stem cells short term culture blood
28 chr1:168470600-168476000 Weak transcription Rectal Smooth Muscle rectum
29 chr1:168470800-168473600 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr1:168470800-168473600 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr1:168470800-168473800 Weak transcription Colon Smooth Muscle Colon
32 chr1:168471200-168472800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:168471200-168473200 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr1:168471200-168473400 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr1:168471600-168472800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr1:168471600-168473600 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr1:168471800-168472600 Enhancers Spleen Spleen
38 chr1:168471800-168472800 Enhancers Primary Natural Killer cells fromperipheralblood blood
39 chr1:168471800-168473000 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr1:168471800-168474400 Enhancers Primary neutrophils fromperipheralblood blood
41 chr1:168472000-168472400 Enhancers Monocytes-CD14+_RO01746 blood
42 chr1:168472000-168483000 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015