Variant report

Variant rs12563551
Chromosome Location chr1:168423843-168423844
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:168422800-168424000 Enhancers Rectal Smooth Muscle rectum
2 chr1:168422800-168425400 Weak transcription HepG2 liver
3 chr1:168422800-168425800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
4 chr1:168422800-168426200 Enhancers NHDF-Ad bronchial
5 chr1:168423000-168425000 Enhancers Muscle Satellite Cultured Cells --
6 chr1:168423000-168426200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr1:168423000-168426200 Enhancers HSMMtube muscle
8 chr1:168423000-168426600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:168423000-168426600 Enhancers HMEC breast
10 chr1:168423000-168430600 Weak transcription Liver Liver
11 chr1:168423200-168424000 Enhancers HSMM muscle
12 chr1:168423200-168424800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:168423400-168424200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:168423400-168424600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:168423400-168424600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr1:168423400-168425400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr1:168423400-168426400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:168423400-168427200 Enhancers NHEK skin
19 chr1:168423600-168424000 Enhancers Osteobl bone
20 chr1:168423600-168425200 Weak transcription Colon Smooth Muscle Colon
21 chr1:168423800-168424600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:168423800-168425400 Weak transcription NH-A brain

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