The 2.0 version of rSNPBase

Variant report

Variant rs12079624
Chromosome Location chr1:150120389-150120390
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150040400-150121400 Weak transcription Pancreas Pancrea
2 chr1:150055000-150120800 Weak transcription Aorta Aorta
3 chr1:150067400-150121200 Weak transcription Colonic Mucosa Colon
4 chr1:150069000-150121000 Weak transcription NHLF lung
5 chr1:150071000-150121000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:150071200-150120600 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr1:150072400-150121000 Weak transcription Brain Angular Gyrus brain
8 chr1:150079200-150121000 Weak transcription Thymus Thymus
9 chr1:150083600-150120800 Weak transcription Brain Hippocampus Middle brain
10 chr1:150085400-150120800 Weak transcription NH-A brain
11 chr1:150085400-150121200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:150085400-150121200 Weak transcription Psoas Muscle Psoas
13 chr1:150085600-150121200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:150085800-150121000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr1:150087000-150121200 Weak transcription Esophagus oesophagus
16 chr1:150087000-150121200 Weak transcription Placenta Placenta
17 chr1:150087800-150120800 Weak transcription Brain Anterior Caudate brain
18 chr1:150087800-150121000 Weak transcription Brain Inferior Temporal Lobe brain
19 chr1:150088000-150120800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:150088000-150120800 Weak transcription Fetal Muscle Trunk muscle
21 chr1:150091200-150120400 Weak transcription Colon Smooth Muscle Colon
22 chr1:150091400-150121000 Weak transcription Duodenum Mucosa Duodenum
23 chr1:150091800-150121000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:150094200-150121200 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:150095000-150120800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr1:150099400-150121200 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr1:150100200-150120400 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr1:150100400-150120800 Weak transcription Fetal Stomach stomach
29 chr1:150101000-150121200 Weak transcription Lung lung
30 chr1:150102800-150120800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:150105200-150121000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:150105200-150121200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:150108000-150120800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:150108000-150121400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr1:150108200-150121200 Weak transcription Osteobl bone
36 chr1:150108800-150121400 Weak transcription Brain Substantia Nigra brain
37 chr1:150111400-150121200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:150111600-150121000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:150113400-150121200 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr1:150114200-150120800 Weak transcription NHDF-Ad bronchial
41 chr1:150114600-150120800 Weak transcription Fetal Kidney kidney
42 chr1:150114600-150121400 Weak transcription Small Intestine intestine
43 chr1:150114800-150125200 Weak transcription Hela-S3 cervix
44 chr1:150115000-150120800 Weak transcription Right Ventricle heart
45 chr1:150115000-150120800 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr1:150115200-150120800 Weak transcription Adipose Nuclei Adipose
47 chr1:150116200-150120800 Weak transcription Liver Liver
48 chr1:150117200-150120600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr1:150117200-150121200 Weak transcription Left Ventricle heart
50 chr1:150117200-150121400 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015