The 2.0 version of rSNPBase

Variant report

Variant rs12086105
Chromosome Location chr1:220396916-220396917
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220325000-220398400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:220374600-220407600 Weak transcription Fetal Brain Male brain
3 chr1:220378800-220398200 Weak transcription Psoas Muscle Psoas
4 chr1:220378800-220398200 Weak transcription Small Intestine intestine
5 chr1:220379000-220418200 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr1:220379200-220397600 Weak transcription Colon Smooth Muscle Colon
7 chr1:220379200-220400400 Weak transcription Right Ventricle heart
8 chr1:220379200-220409600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:220379200-220410800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr1:220379200-220422600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr1:220380400-220398200 Weak transcription Brain Anterior Caudate brain
12 chr1:220380400-220400800 Weak transcription Spleen Spleen
13 chr1:220381200-220422000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:220384000-220399400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:220384200-220398200 Weak transcription Aorta Aorta
16 chr1:220384200-220398200 Weak transcription Stomach Smooth Muscle stomach
17 chr1:220384200-220398600 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr1:220384200-220398800 Weak transcription Fetal Intestine Small intestine
19 chr1:220384200-220400000 Weak transcription Pancreas Pancrea
20 chr1:220384200-220400200 Weak transcription Fetal Muscle Leg muscle
21 chr1:220384200-220400400 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr1:220384200-220402800 Weak transcription NHLF lung
23 chr1:220384200-220404400 Weak transcription Ovary ovary
24 chr1:220384200-220408800 Weak transcription A549 lung
25 chr1:220384200-220420600 Weak transcription Fetal Kidney kidney
26 chr1:220384200-220423000 Weak transcription Esophagus oesophagus
27 chr1:220384200-220425800 Weak transcription Placenta Amnion Placenta Amnion
28 chr1:220384400-220398200 Weak transcription H9 Cell Line embryonic stem cell
29 chr1:220384400-220400200 Weak transcription Fetal Muscle Trunk muscle
30 chr1:220384400-220413400 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr1:220384800-220398000 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr1:220384800-220398200 Weak transcription Rectal Smooth Muscle rectum
33 chr1:220384800-220398800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr1:220384800-220398800 Weak transcription Fetal Intestine Large intestine
35 chr1:220384800-220399000 Weak transcription Primary hematopoietic stem cells blood
36 chr1:220384800-220399000 Weak transcription Colonic Mucosa Colon
37 chr1:220384800-220400000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:220384800-220400000 Weak transcription Left Ventricle heart
39 chr1:220384800-220400800 Weak transcription Duodenum Mucosa Duodenum
40 chr1:220384800-220401000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:220384800-220401800 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr1:220384800-220404400 Weak transcription HSMMtube muscle
43 chr1:220384800-220408000 Weak transcription Hela-S3 cervix
44 chr1:220384800-220417000 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr1:220385000-220403400 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr1:220385000-220403800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr1:220385000-220405000 Weak transcription Placenta Placenta
48 chr1:220385200-220397800 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr1:220385400-220398200 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr1:220385400-220409000 Weak transcription NH-A brain

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Last update: Aug 31, 2015