The 2.0 version of rSNPBase

Variant report

Variant rs12094835
Chromosome Location chr1:84394792-84394793
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84362600-84403200 Weak transcription Fetal Brain Male brain
2 chr1:84366800-84399400 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr1:84368200-84394800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr1:84368400-84416600 Weak transcription NHLF lung
5 chr1:84368400-84428400 Weak transcription Pancreas Pancrea
6 chr1:84376800-84405000 Weak transcription Left Ventricle heart
7 chr1:84381000-84394800 Weak transcription Muscle Satellite Cultured Cells --
8 chr1:84381000-84397400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr1:84382600-84409800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:84383200-84408600 Weak transcription Adipose Nuclei Adipose
11 chr1:84384800-84406600 Weak transcription Aorta Aorta
12 chr1:84385200-84408600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:84386200-84397800 Weak transcription Brain Inferior Temporal Lobe brain
14 chr1:84386600-84401600 Weak transcription Stomach Smooth Muscle stomach
15 chr1:84386800-84398400 Weak transcription HSMMtube muscle
16 chr1:84386800-84398800 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr1:84386800-84403200 Weak transcription NHDF-Ad bronchial
18 chr1:84387000-84408400 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr1:84387000-84408400 Weak transcription Fetal Muscle Leg muscle
20 chr1:84387000-84410000 Weak transcription Brain Germinal Matrix brain
21 chr1:84388800-84402200 Weak transcription HSMM muscle
22 chr1:84390200-84397600 Weak transcription K562 blood
23 chr1:84390600-84402400 Weak transcription Fetal Brain Female brain
24 chr1:84391200-84397800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr1:84392200-84422400 Weak transcription Fetal Stomach stomach
26 chr1:84392400-84395800 Enhancers Brain Hippocampus Middle brain
27 chr1:84392400-84420400 Weak transcription Fetal Muscle Trunk muscle
28 chr1:84392800-84395200 Enhancers Brain Angular Gyrus brain
29 chr1:84393000-84395000 Enhancers HUES48 Cell Line embryonic stem cell
30 chr1:84393000-84395200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:84393400-84406000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr1:84393600-84397800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:84393600-84399400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:84393800-84395400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:84393800-84397200 Weak transcription Brain Anterior Caudate brain
36 chr1:84393800-84397600 Weak transcription Brain Cingulate Gyrus brain
37 chr1:84393800-84400400 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr1:84394000-84395200 Enhancers Liver Liver
39 chr1:84394000-84408600 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr1:84394200-84395200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr1:84394200-84397200 Weak transcription Brain Substantia Nigra brain
42 chr1:84394400-84395000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015