Variant report
| Variant | rs60455471 |
|---|---|
| Chromosome Location | chr1:84494116-84494117 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr1:84493894..84496229-chr1:84499298..84501973,3 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:26)
| rs_ID | r2[population] |
|---|---|
| rs11163870 | 0.96[ASN][1000 genomes] |
| rs12094835 | 0.96[ASN][1000 genomes] |
| rs12129674 | 0.82[ASN][1000 genomes] |
| rs12563929 | 0.86[ASN][1000 genomes] |
| rs12567738 | 0.86[ASN][1000 genomes] |
| rs12734711 | 0.84[ASN][1000 genomes] |
| rs1521519 | 0.84[ASN][1000 genomes] |
| rs17130873 | 0.86[ASN][1000 genomes] |
| rs17475438 | 0.96[ASN][1000 genomes] |
| rs34654680 | 0.88[ASN][1000 genomes] |
| rs34880060 | 0.86[ASN][1000 genomes] |
| rs34972329 | 0.88[ASN][1000 genomes] |
| rs35000319 | 0.88[ASN][1000 genomes] |
| rs35105659 | 0.88[ASN][1000 genomes] |
| rs35760860 | 0.86[ASN][1000 genomes] |
| rs35960022 | 0.88[ASN][1000 genomes] |
| rs41300540 | 0.82[ASN][1000 genomes] |
| rs57443421 | 0.96[ASN][1000 genomes] |
| rs59779864 | 0.92[ASN][1000 genomes] |
| rs61360062 | 0.81[ASN][1000 genomes] |
| rs61766872 | 0.96[ASN][1000 genomes] |
| rs6699590 | 1.00[ASN][1000 genomes] |
| rs71652665 | 0.86[ASN][1000 genomes] |
| rs71652666 | 0.86[ASN][1000 genomes] |
| rs71652667 | 0.86[ASN][1000 genomes] |
| rs72721436 | 0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:84492600-84499000 | Weak transcription | Pancreas | Pancrea |
