The 2.0 version of rSNPBase

Variant report

Variant rs71652667
Chromosome Location chr1:84552826-84552827
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84544600-84556200 Weak transcription Pancreas Pancrea
2 chr1:84544600-84557200 Weak transcription Gastric stomach
3 chr1:84544800-84556000 Weak transcription Primary T cells from cord blood blood
4 chr1:84544800-84556200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:84545000-84553400 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr1:84545000-84554200 Weak transcription HSMM muscle
7 chr1:84545000-84554400 Weak transcription A549 lung
8 chr1:84545000-84554600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:84545000-84554800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:84545000-84554800 Weak transcription HSMMtube muscle
11 chr1:84545000-84556200 Weak transcription Primary hematopoietic stem cells blood
12 chr1:84545000-84557200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:84545000-84558800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:84545000-84560600 Weak transcription Fetal Lung lung
15 chr1:84545000-84561200 Weak transcription Ovary ovary
16 chr1:84545000-84566800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr1:84545000-84570000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:84545200-84554600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:84545200-84554800 Weak transcription NHEK skin
20 chr1:84545200-84555400 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr1:84545200-84568600 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr1:84545400-84556000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:84545400-84560800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:84545800-84553600 Weak transcription Fetal Heart heart
25 chr1:84545800-84568600 Weak transcription Stomach Smooth Muscle stomach
26 chr1:84546000-84554400 Weak transcription Hela-S3 cervix
27 chr1:84546400-84555000 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr1:84546400-84560400 Weak transcription Dnd41 blood
29 chr1:84549000-84554200 Weak transcription Brain Hippocampus Middle brain
30 chr1:84549200-84555000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:84549400-84553600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr1:84549800-84554600 Weak transcription Brain Cingulate Gyrus brain
33 chr1:84549800-84555000 Weak transcription Brain Inferior Temporal Lobe brain
34 chr1:84550000-84554600 Weak transcription Brain Substantia Nigra brain
35 chr1:84551800-84555400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr1:84552000-84554600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:84552000-84554800 Weak transcription Fetal Intestine Large intestine
38 chr1:84552000-84555000 Weak transcription K562 blood
39 chr1:84552200-84553800 Weak transcription Aorta Aorta
40 chr1:84552200-84554000 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr1:84552200-84554000 Weak transcription Fetal Muscle Leg muscle
42 chr1:84552200-84554400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:84552200-84554600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr1:84552200-84555000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr1:84552200-84555200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:84552200-84556000 Weak transcription Spleen Spleen
47 chr1:84552200-84556200 Weak transcription Left Ventricle heart
48 chr1:84552200-84556200 Weak transcription Right Ventricle heart
49 chr1:84552200-84558600 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr1:84552200-84561800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015