The 2.0 version of rSNPBase

Variant report

Variant rs12097333
Chromosome Location chr1:59158632-59158633
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59118200-59163400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:59119800-59162200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
3 chr1:59119800-59163200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:59121000-59161200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr1:59121400-59161000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr1:59121600-59161200 Strong transcription Primary T helper cells fromperipheralblood blood
7 chr1:59121600-59161200 Strong transcription Primary T regulatory cells fromperipheralblood blood
8 chr1:59122400-59159400 Weak transcription Right Ventricle heart
9 chr1:59123800-59161800 Strong transcription Dnd41 blood
10 chr1:59125000-59162200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr1:59125600-59161200 Strong transcription Rectal Mucosa Donor 29 rectum
12 chr1:59129200-59161000 Strong transcription H1 Cell Line embryonic stem cell
13 chr1:59131200-59161000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:59131200-59161000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr1:59139600-59162800 Weak transcription Fetal Brain Male brain
16 chr1:59139800-59159000 Weak transcription Small Intestine intestine
17 chr1:59139800-59162000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr1:59140200-59158800 Weak transcription Rectal Smooth Muscle rectum
19 chr1:59141200-59158800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr1:59143600-59160600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:59144600-59161800 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr1:59146600-59163200 Strong transcription Osteobl bone
23 chr1:59148000-59161000 Strong transcription HUES6 Cell Line embryonic stem cell
24 chr1:59148000-59164000 Weak transcription A549 lung
25 chr1:59148200-59164400 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr1:59149200-59161000 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr1:59149400-59160200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:59149800-59160000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr1:59151000-59163200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr1:59151400-59161000 Strong transcription Primary T cells fromperipheralblood blood
31 chr1:59151400-59161200 Strong transcription Duodenum Mucosa Duodenum
32 chr1:59151400-59161400 Strong transcription Primary hematopoietic stem cells short term culture blood
33 chr1:59151600-59160000 Strong transcription NHDF-Ad bronchial
34 chr1:59151800-59164400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr1:59152000-59161000 Weak transcription Brain Substantia Nigra brain
36 chr1:59152200-59163200 Strong transcription Primary B cells from peripheral blood blood
37 chr1:59153000-59160600 Strong transcription Primary T helper naive cells fromperipheralblood blood
38 chr1:59153000-59161200 Strong transcription HUVEC blood vessel
39 chr1:59153200-59161200 Strong transcription Primary monocytes fromperipheralblood blood
40 chr1:59153400-59162600 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr1:59153600-59158800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:59153600-59159200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr1:59153600-59161800 Weak transcription Fetal Heart heart
44 chr1:59153600-59164400 Weak transcription Right Atrium heart
45 chr1:59153600-59164800 Weak transcription Esophagus oesophagus
46 chr1:59153800-59159600 Weak transcription Aorta Aorta
47 chr1:59153800-59162000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr1:59153800-59164000 Weak transcription Gastric stomach
49 chr1:59153800-59165000 Weak transcription Pancreas Pancrea
50 chr1:59154200-59161000 Strong transcription Liver Liver

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Last update: Aug 31, 2015