The 2.0 version of rSNPBase

Variant report

Variant rs6701772
Chromosome Location chr1:59162675-59162676
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59118200-59163400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:59119800-59163200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr1:59139600-59162800 Weak transcription Fetal Brain Male brain
4 chr1:59146600-59163200 Strong transcription Osteobl bone
5 chr1:59148000-59164000 Weak transcription A549 lung
6 chr1:59148200-59164400 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr1:59151000-59163200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:59151800-59164400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:59152200-59163200 Strong transcription Primary B cells from peripheral blood blood
10 chr1:59153600-59164400 Weak transcription Right Atrium heart
11 chr1:59153600-59164800 Weak transcription Esophagus oesophagus
12 chr1:59153800-59164000 Weak transcription Gastric stomach
13 chr1:59153800-59165000 Weak transcription Pancreas Pancrea
14 chr1:59155200-59164400 Weak transcription Hela-S3 cervix
15 chr1:59155200-59164600 Weak transcription HSMMtube muscle
16 chr1:59157000-59164200 Strong transcription HSMM muscle
17 chr1:59158000-59164000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr1:59159200-59164200 Weak transcription Colonic Mucosa Colon
19 chr1:59159600-59164000 Weak transcription Fetal Brain Female brain
20 chr1:59159800-59164200 Weak transcription Primary hematopoietic stem cells blood
21 chr1:59159800-59164200 Weak transcription Rectal Smooth Muscle rectum
22 chr1:59159800-59165000 Weak transcription Small Intestine intestine
23 chr1:59160000-59164200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:59160000-59164200 Weak transcription Placenta Amnion Placenta Amnion
25 chr1:59160000-59164200 Weak transcription HMEC breast
26 chr1:59160000-59164200 Weak transcription NHDF-Ad bronchial
27 chr1:59160000-59164400 Weak transcription Brain Germinal Matrix brain
28 chr1:59160200-59162800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr1:59160200-59164200 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr1:59160600-59162800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:59160600-59163400 Weak transcription Psoas Muscle Psoas
32 chr1:59160600-59164000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr1:59160600-59164200 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr1:59160600-59164200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr1:59160600-59164200 Weak transcription Adipose Nuclei Adipose
36 chr1:59160600-59164200 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr1:59160600-59164200 Weak transcription Fetal Stomach stomach
38 chr1:59160600-59164200 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr1:59160600-59164200 Weak transcription Spleen Spleen
40 chr1:59160600-59164400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr1:59160600-59164400 Weak transcription Fetal Intestine Small intestine
42 chr1:59160600-59164800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:59160600-59164800 Weak transcription Fetal Muscle Trunk muscle
44 chr1:59160600-59165000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr1:59160600-59165000 Weak transcription Aorta Aorta
46 chr1:59161000-59163000 Genic enhancers Primary T helper cells PMA-I stimulated --
47 chr1:59161000-59163000 Enhancers Brain Cingulate Gyrus brain
48 chr1:59161000-59163000 Enhancers Brain Substantia Nigra brain
49 chr1:59161000-59163200 Weak transcription Primary T cells fromperipheralblood blood
50 chr1:59161200-59162800 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015