The 2.0 version of rSNPBase

Variant report

Variant rs2064372
Chromosome Location chr1:59152134-59152135
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59118200-59163400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:59119800-59155000 Strong transcription iPS-20b Cell Line embryonic stem cell
3 chr1:59119800-59162200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr1:59119800-59163200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr1:59120000-59153400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr1:59121000-59161200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr1:59121400-59161000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr1:59121600-59161200 Strong transcription Primary T helper cells fromperipheralblood blood
9 chr1:59121600-59161200 Strong transcription Primary T regulatory cells fromperipheralblood blood
10 chr1:59122200-59153400 Weak transcription Esophagus oesophagus
11 chr1:59122400-59153200 Weak transcription Gastric stomach
12 chr1:59122400-59153200 Weak transcription Pancreas Pancrea
13 chr1:59122400-59155200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr1:59122400-59159400 Weak transcription Right Ventricle heart
15 chr1:59123400-59153800 Strong transcription Primary T helper cells PMA-I stimulated --
16 chr1:59123800-59161800 Strong transcription Dnd41 blood
17 chr1:59124000-59156600 Weak transcription Spleen Spleen
18 chr1:59125000-59162200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:59125600-59161200 Strong transcription Rectal Mucosa Donor 29 rectum
20 chr1:59126200-59153400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr1:59129200-59161000 Strong transcription H1 Cell Line embryonic stem cell
22 chr1:59131200-59161000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:59131200-59161000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:59131600-59153200 Weak transcription Aorta Aorta
25 chr1:59136800-59152200 Strong transcription Primary monocytes fromperipheralblood blood
26 chr1:59137200-59155400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
27 chr1:59139400-59156200 Weak transcription Psoas Muscle Psoas
28 chr1:59139600-59162800 Weak transcription Fetal Brain Male brain
29 chr1:59139800-59156200 Weak transcription Lung lung
30 chr1:59139800-59159000 Weak transcription Small Intestine intestine
31 chr1:59139800-59162000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr1:59140200-59158800 Weak transcription Rectal Smooth Muscle rectum
33 chr1:59140400-59157800 Weak transcription Placenta Amnion Placenta Amnion
34 chr1:59141200-59156200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr1:59141200-59158800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr1:59141600-59154600 Weak transcription Hela-S3 cervix
37 chr1:59141800-59158600 Weak transcription NHLF lung
38 chr1:59143400-59154800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr1:59143600-59160600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:59144000-59152400 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr1:59144600-59161800 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr1:59146400-59153000 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr1:59146600-59163200 Strong transcription Osteobl bone
44 chr1:59146800-59155800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:59147000-59153400 Strong transcription NH-A brain
46 chr1:59147200-59156400 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr1:59147800-59153000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr1:59148000-59153600 Strong transcription HUES64 Cell Line embryonic stem cell
49 chr1:59148000-59161000 Strong transcription HUES6 Cell Line embryonic stem cell
50 chr1:59148000-59164000 Weak transcription A549 lung

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Last update: Aug 31, 2015