Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10126067	1.00[YRI][hapmap]
rs10127213	1.00[YRI][hapmap]
rs12115987	1.00[GIH][hapmap]
rs12116153	0.81[ASW][hapmap];0.88[LWK][hapmap];0.88[MKK][hapmap];1.00[YRI][hapmap]
rs16984753	1.00[GIH][hapmap]
rs16984759	1.00[GIH][hapmap];0.80[MKK][hapmap]
rs16984763	1.00[GIH][hapmap]
rs16984771	1.00[GIH][hapmap]
rs16984773	1.00[GIH][hapmap]
rs16984791	1.00[YRI][hapmap]
rs2001044	1.00[GIH][hapmap]
rs5916735	1.00[GIH][hapmap]
rs5962281	1.00[GIH][hapmap]
rs5962290	1.00[GIH][hapmap]
rs5962517	1.00[GIH][hapmap];0.82[MKK][hapmap]
rs5962521	1.00[GIH][hapmap];0.89[LWK][hapmap];0.84[YRI][hapmap]
rs5962533	0.81[ASW][hapmap];0.89[LWK][hapmap];0.88[MKK][hapmap];1.00[YRI][hapmap]
rs5962538	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs5962539	1.00[GIH][hapmap]
rs5962540	1.00[GIH][hapmap]
rs7877795	1.00[GIH][hapmap]
rs7879161	1.00[GIH][hapmap]
rs7892424	1.00[GIH][hapmap]
rs9785562	1.00[GIH][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432352	chrX:104346855-104831855	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:104727800-104747800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chrX:104743000-104747200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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