Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:197806907..197812092-chr1:197812928..197815957,4	K562	blood:
2	chr1:197809186..197812182-chr1:197819659..197821945,2	K562	blood:

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10922288	0.82[CEU][hapmap]
rs10922293	0.85[AFR][1000 genomes]
rs10922299	0.99[ASN][1000 genomes]
rs10922304	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10922305	0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12026183	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12125742	0.85[AFR][1000 genomes]
rs12137370	0.85[AFR][1000 genomes]
rs12140293	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12740849	0.82[CEU][hapmap]
rs1342694	0.83[CEU][hapmap]
rs1342696	0.81[CEU][hapmap]
rs1499593	0.82[CEU][hapmap]
rs1539413	0.82[CEU][hapmap]
rs1622740	0.82[CEU][hapmap]
rs1747822	0.82[CEU][hapmap]
rs1747823	0.83[CEU][hapmap]
rs1747825	0.83[CEU][hapmap]
rs1775456	0.82[CEU][hapmap]
rs1775464	0.83[CEU][hapmap]
rs1775465	0.87[CEU][hapmap]
rs1775466	0.82[CEU][hapmap]
rs1775467	0.82[CEU][hapmap]
rs1775468	0.81[CEU][hapmap]
rs1775469	0.83[CEU][hapmap]
rs2477069	0.82[CEU][hapmap]
rs2488394	0.82[CEU][hapmap]
rs2488396	0.83[CEU][hapmap]
rs2497862	0.83[CEU][hapmap]
rs2649556	0.83[CEU][hapmap]
rs4915248	0.85[AFR][1000 genomes]
rs4915566	0.85[AFR][1000 genomes]
rs6697696	0.83[CEU][hapmap]
rs6704186	0.81[CEU][hapmap]
rs7526770	0.85[AFR][1000 genomes]
rs7538522	0.85[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009697	chr1:197804294-197825037	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:197808000-197814400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr1:197808400-197810800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr1:197808600-197811200	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr1:197808600-197811200	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr1:197808600-197811200	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr1:197808800-197812600	Weak transcription	NHEK	skin
7	chr1:197810400-197810800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr1:197810400-197810800	Enhancers	Colonic Mucosa	Colon
9	chr1:197810400-197810800	Enhancers	K562	blood
10	chr1:197810400-197811800	Enhancers	Fetal Lung	lung
11	chr1:197810400-197812800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr1:197810600-197811400	Enhancers	Rectal Mucosa Donor 29	rectum
13	chr1:197810600-197811600	Enhancers	Rectal Mucosa Donor 31	rectum
14	chr1:197810600-197811800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr1:197810600-197812000	Enhancers	NHDF-Ad	bronchial
16	chr1:197810600-197812000	Enhancers	Osteobl	bone

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