Variant report

Variant	rs12128996
Chromosome Location	chr1:71120241-71120242
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11209644	0.81[AMR][1000 genomes]
rs11209645	0.81[AMR][1000 genomes]
rs12117620	0.81[AMR][1000 genomes]
rs12122295	0.82[EUR][1000 genomes]
rs12140094	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12140313	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs17131392	0.82[EUR][1000 genomes]
rs1999676	0.81[EUR][1000 genomes]
rs55933100	0.81[AMR][1000 genomes]
rs56132847	0.81[AMR][1000 genomes]
rs6683555	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv871024	chr1:71088106-71169865	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv871703	chr1:71093805-71127061	Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71120200-71121800	Weak transcription	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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