Variant report

Variant	rs12136043
Chromosome Location	chr1:95398210-95398211
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:95387353..95389524-chr1:95396691..95399201,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs2148365	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2797625	0.87[ASN][1000 genomes]
rs34542809	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34873525	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35558519	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4847371	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4847372	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:77 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:95393400-95401800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr1:95393600-95404000	Weak transcription	Primary hematopoietic stem cells	blood
3	chr1:95394000-95415600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr1:95395400-95399200	Weak transcription	Brain Germinal Matrix	brain
5	chr1:95395400-95400200	Weak transcription	HUVEC	blood vessel
6	chr1:95395400-95400600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr1:95395400-95400600	Weak transcription	A549	lung
8	chr1:95395400-95400600	Weak transcription	Osteobl	bone
9	chr1:95395400-95400800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr1:95395400-95401800	Weak transcription	Brain Anterior Caudate	brain
11	chr1:95395400-95404000	Weak transcription	Brain Angular Gyrus	brain
12	chr1:95395400-95410400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr1:95395600-95398600	Weak transcription	HUES6 Cell Line	embryonic stem cell
14	chr1:95395600-95398600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr1:95395600-95398600	Weak transcription	Adipose Nuclei	Adipose
16	chr1:95395600-95398600	Weak transcription	Aorta	Aorta
17	chr1:95395600-95398600	Weak transcription	Sigmoid Colon	Sigmoid Colon
18	chr1:95395600-95398800	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr1:95395600-95398800	Weak transcription	Left Ventricle	heart
20	chr1:95395600-95400400	Weak transcription	HUES48 Cell Line	embryonic stem cell
21	chr1:95395600-95400400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr1:95395600-95400400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr1:95395600-95400600	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr1:95395600-95400600	Weak transcription	NH-A	brain
25	chr1:95395600-95400800	Weak transcription	Brain Substantia Nigra	brain
26	chr1:95395600-95400800	Weak transcription	Fetal Kidney	kidney
27	chr1:95395600-95401200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr1:95395600-95401400	Weak transcription	H9 Cell Line	embryonic stem cell
29	chr1:95395600-95401400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr1:95395600-95401400	Weak transcription	Placenta Amnion	Placenta Amnion
31	chr1:95395600-95401800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
32	chr1:95395600-95401800	Weak transcription	Colon Smooth Muscle	Colon
33	chr1:95395600-95401800	Weak transcription	Lung	lung
34	chr1:95395600-95401800	Weak transcription	Rectal Smooth Muscle	rectum
35	chr1:95395600-95401800	Weak transcription	NHLF	lung
36	chr1:95395600-95402000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr1:95395600-95403400	Weak transcription	Right Atrium	heart
38	chr1:95395600-95403800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr1:95395600-95403800	Weak transcription	Gastric	stomach
40	chr1:95395600-95403800	Weak transcription	Right Ventricle	heart
41	chr1:95395600-95404200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
42	chr1:95395600-95407000	Weak transcription	Rectal Mucosa Donor 31	rectum
43	chr1:95395600-95412400	Weak transcription	Colonic Mucosa	Colon
44	chr1:95395600-95412400	Weak transcription	Pancreas	Pancrea
45	chr1:95395600-95416400	Weak transcription	Brain Hippocampus Middle	brain
46	chr1:95395800-95398600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr1:95395800-95400200	Weak transcription	Muscle Satellite Cultured Cells	--
48	chr1:95395800-95401400	Weak transcription	HUES64 Cell Line	embryonic stem cell
49	chr1:95395800-95401800	Weak transcription	Duodenum Smooth Muscle	Duodenum
50	chr1:95395800-95408600	Weak transcription	Brain Cingulate Gyrus	brain

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