Variant report

Variant	rs4847372
Chromosome Location	chr1:95424222-95424223
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:95421951..95424595-chr1:95431431..95434214,2	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11165274	1.00[JPT][hapmap]
rs12136043	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2148365	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2797625	0.89[CHB][hapmap];1.00[CHD][hapmap];0.82[TSI][hapmap];0.91[ASN][1000 genomes]
rs34542809	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34873525	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35558519	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3818929	1.00[JPT][hapmap]
rs4847368	1.00[JPT][hapmap]
rs4847371	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:95413200-95427600	Weak transcription	Colonic Mucosa	Colon
2	chr1:95415800-95428400	Weak transcription	Lung	lung
3	chr1:95416000-95427400	Weak transcription	A549	lung
4	chr1:95417800-95424600	Enhancers	HepG2	liver
5	chr1:95420800-95426000	Weak transcription	Placenta	Placenta
6	chr1:95421600-95426200	Weak transcription	Fetal Thymus	thymus
7	chr1:95421600-95428200	Weak transcription	Aorta	Aorta
8	chr1:95421600-95428200	Weak transcription	Fetal Kidney	kidney
9	chr1:95421600-95429200	Weak transcription	Fetal Muscle Trunk	muscle
10	chr1:95421600-95429600	Weak transcription	Spleen	Spleen
11	chr1:95421800-95425800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr1:95421800-95426200	Weak transcription	Fetal Muscle Leg	muscle
13	chr1:95421800-95426800	Weak transcription	Adipose Nuclei	Adipose
14	chr1:95421800-95427200	Weak transcription	Stomach Mucosa	stomach
15	chr1:95421800-95427400	Weak transcription	HSMMtube	muscle
16	chr1:95421800-95427600	Weak transcription	Brain Hippocampus Middle	brain
17	chr1:95421800-95427600	Weak transcription	Fetal Lung	lung
18	chr1:95421800-95428200	Weak transcription	Right Ventricle	heart
19	chr1:95421800-95428200	Weak transcription	Stomach Smooth Muscle	stomach
20	chr1:95421800-95428400	Weak transcription	Left Ventricle	heart
21	chr1:95422000-95425800	Weak transcription	Sigmoid Colon	Sigmoid Colon
22	chr1:95422000-95426000	Weak transcription	Small Intestine	intestine
23	chr1:95422000-95426600	Weak transcription	Rectal Mucosa Donor 29	rectum
24	chr1:95422000-95426800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr1:95422000-95426800	Weak transcription	Rectal Mucosa Donor 31	rectum
26	chr1:95422000-95427000	Weak transcription	Fetal Intestine Small	intestine
27	chr1:95422000-95427600	Weak transcription	Colon Smooth Muscle	Colon
28	chr1:95422000-95428200	Weak transcription	Rectal Smooth Muscle	rectum
29	chr1:95422000-95428600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr1:95422000-95450800	Weak transcription	Cortex derived primary cultured neurospheres	brain
31	chr1:95422400-95426800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr1:95422400-95426800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr1:95422800-95428600	Weak transcription	Esophagus	oesophagus
34	chr1:95423600-95425000	Enhancers	Duodenum Mucosa	Duodenum
35	chr1:95423600-95428200	Weak transcription	Fetal Heart	heart
36	chr1:95424000-95424400	Enhancers	Duodenum Smooth Muscle	Duodenum
37	chr1:95424200-95426800	Weak transcription	Liver	Liver

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