The 2.0 version of rSNPBase

Variant report

Variant rs34873525
Chromosome Location chr1:95417294-95417295
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95399400-95418800 Weak transcription Ovary ovary
2 chr1:95402400-95419400 Weak transcription H9 Cell Line embryonic stem cell
3 chr1:95404200-95421400 Weak transcription Aorta Aorta
4 chr1:95406000-95419400 Weak transcription Fetal Kidney kidney
5 chr1:95408400-95420000 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr1:95410600-95421600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:95411800-95419800 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr1:95413000-95420200 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr1:95413200-95419400 Weak transcription Left Ventricle heart
10 chr1:95413200-95419400 Weak transcription Rectal Smooth Muscle rectum
11 chr1:95413200-95427600 Weak transcription Colonic Mucosa Colon
12 chr1:95413400-95419400 Weak transcription Colon Smooth Muscle Colon
13 chr1:95413400-95419400 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr1:95413400-95421000 Weak transcription Pancreas Pancrea
15 chr1:95413600-95420000 Weak transcription Right Atrium heart
16 chr1:95414400-95418400 Enhancers Hela-S3 cervix
17 chr1:95415200-95417600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr1:95415200-95417600 Enhancers NHDF-Ad bronchial
19 chr1:95415200-95418600 Enhancers Liver Liver
20 chr1:95415400-95417600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:95415400-95417800 Enhancers NHEK skin
22 chr1:95415400-95422400 Enhancers Fetal Adrenal Gland Adrenal Gland
23 chr1:95415600-95417600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:95415600-95417600 Enhancers Duodenum Mucosa Duodenum
25 chr1:95415600-95418200 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr1:95415800-95420000 Weak transcription Right Ventricle heart
27 chr1:95415800-95421200 Weak transcription Esophagus oesophagus
28 chr1:95415800-95421200 Weak transcription HSMMtube muscle
29 chr1:95415800-95428400 Weak transcription Lung lung
30 chr1:95416000-95418000 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr1:95416000-95419400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:95416000-95419400 Weak transcription Fetal Lung lung
33 chr1:95416000-95419600 Weak transcription NHLF lung
34 chr1:95416000-95420000 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr1:95416000-95421200 Weak transcription Small Intestine intestine
36 chr1:95416000-95421400 Weak transcription Stomach Mucosa stomach
37 chr1:95416000-95427400 Weak transcription A549 lung
38 chr1:95416200-95421000 Weak transcription Fetal Intestine Large intestine
39 chr1:95416200-95421200 Weak transcription Fetal Thymus thymus
40 chr1:95416400-95417800 Weak transcription HepG2 liver
41 chr1:95416600-95417800 Enhancers HMEC breast
42 chr1:95416600-95418000 Weak transcription Dnd41 blood
43 chr1:95416600-95418400 Enhancers Placenta Amnion Placenta Amnion
44 chr1:95416600-95420000 Weak transcription Osteobl bone
45 chr1:95416800-95417800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr1:95416800-95417800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr1:95416800-95418400 Weak transcription Fetal Heart heart
48 chr1:95416800-95420200 Weak transcription NH-A brain
49 chr1:95416800-95420800 Enhancers Placenta Placenta
50 chr1:95417000-95417400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015