Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10496633	1.00[CHB][hapmap]
rs11675400	1.00[CHB][hapmap]
rs11677559	1.00[CHB][hapmap]
rs11686392	1.00[CHB][hapmap]
rs11689672	1.00[CHB][hapmap]
rs11694708	1.00[CHB][hapmap]
rs1213973	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1439131	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17211596	1.00[CHB][hapmap]
rs17211765	1.00[CHB][hapmap]
rs17212475	1.00[CHB][hapmap]
rs17213071	1.00[CHB][hapmap]
rs17213092	1.00[CHB][hapmap]
rs17213203	1.00[CHB][hapmap]
rs17270902	1.00[CHB][hapmap]
rs17279088	1.00[CHB][hapmap]
rs17319464	1.00[CHB][hapmap]
rs17319680	1.00[CHB][hapmap]
rs17319771	1.00[CHB][hapmap]
rs17319827	1.00[CHB][hapmap]
rs2420554	1.00[CHB][hapmap]
rs2901195	1.00[CHB][hapmap]
rs4563225	1.00[CHB][hapmap]
rs72845422	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531408	chr2:124727329-125011247	Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:124787000-124790600	Weak transcription	Fetal Brain Female	brain
2	chr2:124790200-124791200	Enhancers	Brain Germinal Matrix	brain
3	chr2:124790400-124790600	Enhancers	Pancreatic Islets	Pancreatic Islet

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