Variant report

Variant	rs12142477
Chromosome Location	chr1:165587811-165587812
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12119602	0.82[EUR][1000 genomes]
rs12125420	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12128974	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12130157	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12131992	0.82[EUR][1000 genomes]
rs12133779	0.83[EUR][1000 genomes]
rs16847398	0.82[EUR][1000 genomes]
rs16847570	0.94[ASN][1000 genomes]
rs1913836	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4147146	0.85[EUR][1000 genomes]
rs4147598	0.85[AMR][1000 genomes]
rs7554080	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165586400-165589400	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr1:165586800-165588800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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