Variant report
| Variant | rs12188066 |
|---|---|
| Chromosome Location | chr5:145483679-145483680 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:145459800-145492000 | Weak transcription | HSMMtube | muscle |
| 2 | chr5:145466600-145484200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 3 | chr5:145469600-145492000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 4 | chr5:145470200-145483800 | Weak transcription | HSMM | muscle |
| 5 | chr5:145471800-145492600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 6 | chr5:145473600-145491400 | Weak transcription | Fetal Brain Female | brain |
| 7 | chr5:145474000-145491600 | Weak transcription | Primary B cells from cord blood | blood |
| 8 | chr5:145474200-145491000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 9 | chr5:145474400-145492200 | Weak transcription | Brain Angular Gyrus | brain |
| 10 | chr5:145474600-145491000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 11 | chr5:145475000-145495800 | Weak transcription | Brain Substantia Nigra | brain |
| 12 | chr5:145475200-145491000 | Weak transcription | A549 | lung |
| 13 | chr5:145475200-145491800 | Weak transcription | Primary T cells from cord blood | blood |
| 14 | chr5:145478000-145487800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 15 | chr5:145478000-145492600 | Weak transcription | Fetal Stomach | stomach |
| 16 | chr5:145478200-145484000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 17 | chr5:145478200-145497600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 18 | chr5:145478400-145491200 | Weak transcription | Brain Anterior Caudate | brain |
| 19 | chr5:145478400-145492800 | Weak transcription | Brain Hippocampus Middle | brain |
| 20 | chr5:145478400-145493400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 21 | chr5:145478400-145497600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 22 | chr5:145478800-145492600 | Weak transcription | Fetal Intestine Small | intestine |
| 23 | chr5:145480200-145494000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 24 | chr5:145481200-145493800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 25 | chr5:145481200-145560200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 26 | chr5:145481400-145489200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 27 | chr5:145481400-145491000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 28 | chr5:145481600-145498400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 29 | chr5:145481800-145491200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 30 | chr5:145481800-145492000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 31 | chr5:145482000-145491600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 32 | chr5:145482200-145484200 | Weak transcription | Fetal Muscle Leg | muscle |
| 33 | chr5:145482200-145484400 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 34 | chr5:145482200-145491800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 35 | chr5:145482200-145497600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 36 | chr5:145482200-145497800 | Weak transcription | Brain Germinal Matrix | brain |
| 37 | chr5:145482200-145500800 | Weak transcription | Aorta | Aorta |
| 38 | chr5:145482400-145484200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 39 | chr5:145482400-145491000 | Weak transcription | Hela-S3 | cervix |
| 40 | chr5:145482400-145491400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 41 | chr5:145482400-145491600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 42 | chr5:145482400-145497800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 43 | chr5:145482600-145483800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 44 | chr5:145482600-145484000 | Enhancers | NHEK | skin |
| 45 | chr5:145482600-145491400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 46 | chr5:145482600-145492200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 47 | chr5:145482600-145492400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 48 | chr5:145482600-145501200 | Weak transcription | Thymus | Thymus |
| 49 | chr5:145482800-145491400 | Weak transcription | Adipose Nuclei | Adipose |
| 50 | chr5:145482800-145491600 | Weak transcription | HUVEC | blood vessel |
