Variant report
| Variant | rs13162175 |
|---|---|
| Chromosome Location | chr5:145582811-145582812 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:145582000-145583800 | Active TSS | Primary T helper naive cells from peripheral blood | blood |
| 2 | chr5:145582000-145583800 | Active TSS | Brain Substantia Nigra | brain |
| 3 | chr5:145582000-145583800 | Active TSS | Duodenum Mucosa | Duodenum |
| 4 | chr5:145582000-145583800 | Active TSS | Duodenum Smooth Muscle | Duodenum |
| 5 | chr5:145582000-145583800 | Active TSS | Fetal Brain Male | brain |
| 6 | chr5:145582000-145583800 | Active TSS | Rectal Mucosa Donor 31 | rectum |
| 7 | chr5:145582000-145584000 | Active TSS | Rectal Mucosa Donor 29 | rectum |
| 8 | chr5:145582000-145584200 | Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
| 9 | chr5:145582000-145584400 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
| 10 | chr5:145582000-145584800 | Active TSS | Hela-S3 | cervix |
| 11 | chr5:145582000-145585200 | Active TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 12 | chr5:145582000-145585400 | Active TSS | HUES6 Cell Line | embryonic stem cell |
| 13 | chr5:145582000-145585800 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
| 14 | chr5:145582200-145583200 | Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 15 | chr5:145582200-145583200 | Active TSS | Brain Germinal Matrix | brain |
| 16 | chr5:145582200-145583600 | Active TSS | HepG2 | liver |
| 17 | chr5:145582200-145583800 | Active TSS | Primary T helper naive cells fromperipheralblood | blood |
| 18 | chr5:145582200-145583800 | Active TSS | Brain Cingulate Gyrus | brain |
| 19 | chr5:145582200-145584000 | Active TSS | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 20 | chr5:145582200-145584200 | Active TSS | ES-WA7 Cell Line | embryonic stem cell |
| 21 | chr5:145582200-145584200 | Active TSS | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 22 | chr5:145582200-145584200 | Active TSS | Fetal Intestine Small | intestine |
| 23 | chr5:145582200-145584400 | Active TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 24 | chr5:145582200-145584400 | Active TSS | ES-UCSF4 Cell Line | embryonic stem cell |
| 25 | chr5:145582200-145584400 | Active TSS | Aorta | Aorta |
| 26 | chr5:145582200-145584400 | Active TSS | Fetal Thymus | thymus |
| 27 | chr5:145582200-145584400 | Active TSS | Ovary | ovary |
| 28 | chr5:145582200-145584400 | Active TSS | Right Atrium | heart |
| 29 | chr5:145582200-145584600 | Active TSS | HSMM | muscle |
| 30 | chr5:145582200-145584800 | Active TSS | HUES64 Cell Line | embryonic stem cell |
| 31 | chr5:145582200-145585000 | Active TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 32 | chr5:145582200-145585200 | Active TSS | H1 Cell Line | embryonic stem cell |
| 33 | chr5:145582200-145585600 | Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 34 | chr5:145582200-145585800 | Active TSS | HUES48 Cell Line | embryonic stem cell |
| 35 | chr5:145582400-145583000 | Flanking Active TSS | Primary neutrophils fromperipheralblood | blood |
| 36 | chr5:145582400-145583000 | Flanking Active TSS | Primary B cells from cord blood | blood |
| 37 | chr5:145582400-145583000 | Flanking Active TSS | Primary hematopoietic stem cells | blood |
| 38 | chr5:145582400-145583000 | Flanking Active TSS | Primary mononuclear cells fromperipheralblood | Blood |
| 39 | chr5:145582400-145583600 | Active TSS | Primary T cells from cord blood | blood |
| 40 | chr5:145582400-145583600 | Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 41 | chr5:145582400-145583800 | Active TSS | Primary T helper memory cells from peripheral blood 2 | blood |
| 42 | chr5:145582400-145583800 | Active TSS | Liver | Liver |
| 43 | chr5:145582400-145583800 | Active TSS | Brain Hippocampus Middle | brain |
| 44 | chr5:145582400-145583800 | Active TSS | Brain Inferior Temporal Lobe | brain |
| 45 | chr5:145582400-145583800 | Active TSS | Fetal Adrenal Gland | Adrenal Gland |
| 46 | chr5:145582400-145583800 | Active TSS | Placenta Amnion | Placenta Amnion |
| 47 | chr5:145582400-145583800 | Active TSS | Rectal Smooth Muscle | rectum |
| 48 | chr5:145582400-145583800 | Active TSS | Stomach Mucosa | stomach |
| 49 | chr5:145582400-145583800 | Active TSS | Dnd41 | blood |
| 50 | chr5:145582400-145584000 | Active TSS | Colon Smooth Muscle | Colon |
