Variant report

Variant	rs12191778
Chromosome Location	chr6:11914087-11914088
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:11908909..11912016-chr6:11912838..11916318,3	K562	blood:
2	chr6:11908584..11910107-chr6:11912503..11915052,2	MCF-7	breast:
3	chr6:11658704..11660656-chr6:11912465..11915132,2	K562	blood:
4	chr6:11913765..11915487-chr6:11938555..11940311,2	K562	blood:
5	chr6:11911981..11914460-chr6:11917367..11919083,2	K562	blood:
6	chr6:11913987..11915505-chr6:11938167..11940311,2	K562	blood:
7	chr6:11909709..11911826-chr6:11913268..11914857,2	MCF-7	breast:
8	chr6:11911731..11914610-chr6:11928299..11930986,2	K562	blood:

No data

No data

No data

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10456449	0.98[ASN][1000 genomes]
rs12194391	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12196304	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12196906	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12199144	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12201079	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12201333	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12203175	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12207789	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12209572	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12211163	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12213818	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12214146	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61708065	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11910600-11918000	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr6:11913200-11915000	ZNF genes & repeats	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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