Variant report

Variant	rs61708065
Chromosome Location	chr6:11917538-11917539
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:11915689..11918284-chr6:11987739..11989572,2	K562	blood:
2	chr6:11917193..11921294-chr6:12011034..12015671,5	K562	blood:
3	chr6:11916810..11918568-chr6:11931723..11933958,2	K562	blood:
4	chr6:11914819..11917032-chr6:11917286..11919137,2	K562	blood:
5	chr6:11916050..11918300-chr6:11921352..11923216,2	K562	blood:
6	chr6:11911981..11914460-chr6:11917367..11919083,2	K562	blood:
7	chr6:11916020..11917550-chr6:11921352..11923792,2	K562	blood:
8	chr6:11916741..11918485-chr6:12009414..12011071,2	K562	blood:
9	chr6:11914759..11918485-chr6:12007071..12010914,5	K562	blood:

No data

No data

No data

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10456449	0.96[ASN][1000 genomes]
rs12191778	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12194391	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12196304	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12196906	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12199144	1.00[EUR][1000 genomes]
rs12201079	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12201333	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12203175	1.00[EUR][1000 genomes]
rs12207789	1.00[EUR][1000 genomes]
rs12209572	1.00[EUR][1000 genomes]
rs12211163	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12213818	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12214146	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6903153	1.00[AMR][1000 genomes]
rs7753363	1.00[AMR][1000 genomes]
rs7775953	1.00[AMR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11910600-11918000	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr6:11915400-11918000	Weak transcription	K562	blood
3	chr6:11916000-11919200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr6:11917000-11918200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr6:11917400-11917600	Enhancers	Right Atrium	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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