Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10755418	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10806231	0.82[EUR][1000 genomes]
rs10806232	0.81[EUR][1000 genomes]
rs10806233	0.81[EUR][1000 genomes]
rs10943838	0.80[EUR][1000 genomes]
rs10943842	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12199519	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1361684	0.84[EUR][1000 genomes]
rs1418296	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1418299	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1418300	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1418301	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1935417	0.89[EUR][1000 genomes]
rs1935418	0.89[EUR][1000 genomes]
rs2211370	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs4449673	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4535596	0.89[EUR][1000 genomes]
rs4540297	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4706917	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6903637	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6913193	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3358208	chr6:82677282-82700658	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82678000-82678600	Enhancers	Primary neutrophils fromperipheralblood	blood
2	chr6:82678200-82679000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
3	chr6:82678200-82680000	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr6:82678400-82678600	Enhancers	Esophagus	oesophagus

Quick Search: