Variant report

Variant	rs2211370
Chromosome Location	chr6:82690354-82690355
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10755418	0.83[AMR][1000 genomes]
rs10943842	0.82[AMR][1000 genomes]
rs12194197	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs1418296	0.80[AMR][1000 genomes]
rs1418299	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1418300	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1418301	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4449673	0.81[AMR][1000 genomes]
rs4706917	0.83[AMR][1000 genomes]
rs6903637	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6913193	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3358208	chr6:82677282-82700658	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82684000-82691200	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr6:82687400-82690800	Weak transcription	NHDF-Ad	bronchial
3	chr6:82688000-82690800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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