Variant report

Variant	rs12205385
Chromosome Location	chr6:37181813-37181814
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1055460	0.90[ASN][1000 genomes]
rs1055461	0.90[ASN][1000 genomes]
rs11755738	0.84[ASN][1000 genomes]
rs12209150	0.83[EUR][1000 genomes]
rs262950	0.82[EUR][1000 genomes]
rs4714048	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs55697306	0.84[ASN][1000 genomes]
rs55761393	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs55866815	0.84[ASN][1000 genomes]
rs6912670	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7759976	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9462284	0.84[ASN][1000 genomes]
rs9470535	0.84[ASN][1000 genomes]
rs9470536	0.84[ASN][1000 genomes]
rs9470540	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37176000-37182600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr6:37176200-37189800	Weak transcription	Thymus	Thymus
3	chr6:37178200-37184200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr6:37179000-37185600	Weak transcription	Dnd41	blood
5	chr6:37180200-37185400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
6	chr6:37181400-37183000	Enhancers	Primary neutrophils fromperipheralblood	blood
7	chr6:37181800-37182000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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