The 2.0 version of rSNPBase

Variant report

Variant rs12214557
Chromosome Location chr6:107038658-107038659
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:106996400-107074000 Weak transcription Fetal Kidney kidney
2 chr6:107010200-107064600 Weak transcription A549 lung
3 chr6:107014400-107038800 Weak transcription Fetal Brain Female brain
4 chr6:107016200-107039400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr6:107017800-107041000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr6:107018000-107052600 Weak transcription Colonic Mucosa Colon
7 chr6:107018400-107066400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr6:107018400-107076400 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr6:107018600-107039000 Weak transcription Placenta Placenta
10 chr6:107018800-107039400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr6:107018800-107076200 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr6:107019000-107076200 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr6:107019800-107076400 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr6:107022000-107076400 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr6:107023400-107039000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr6:107023400-107039600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr6:107023400-107050200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr6:107023400-107068800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr6:107023400-107076600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr6:107023600-107038800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr6:107026400-107038800 Weak transcription Brain Anterior Caudate brain
22 chr6:107029600-107052600 Weak transcription Pancreas Pancrea
23 chr6:107030800-107076800 Weak transcription Small Intestine intestine
24 chr6:107031000-107038800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr6:107031200-107038800 Weak transcription Rectal Smooth Muscle rectum
26 chr6:107031200-107042200 Weak transcription Esophagus oesophagus
27 chr6:107031200-107052200 Weak transcription Thymus Thymus
28 chr6:107031200-107052600 Weak transcription Gastric stomach
29 chr6:107031200-107052800 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr6:107031200-107058800 Weak transcription Psoas Muscle Psoas
31 chr6:107031200-107077000 Weak transcription Spleen Spleen
32 chr6:107031400-107048000 Weak transcription Lung lung
33 chr6:107031400-107065200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr6:107031400-107076200 Weak transcription Fetal Muscle Trunk muscle
35 chr6:107031400-107076600 Weak transcription Brain Angular Gyrus brain
36 chr6:107031600-107039000 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr6:107031800-107076600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr6:107032000-107038800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr6:107032600-107039000 Weak transcription Brain Substantia Nigra brain
40 chr6:107032600-107054000 Weak transcription H1 Cell Line embryonic stem cell
41 chr6:107033000-107076600 Weak transcription Aorta Aorta
42 chr6:107033200-107061000 Weak transcription Colon Smooth Muscle Colon
43 chr6:107033400-107039000 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr6:107034400-107057400 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr6:107034800-107040600 Strong transcription Primary T cells from cord blood blood
46 chr6:107035000-107047800 Weak transcription Fetal Brain Male brain
47 chr6:107035400-107076600 Weak transcription Right Ventricle heart
48 chr6:107035600-107038800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr6:107035600-107038800 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr6:107035600-107039000 Weak transcription Ovary ovary

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015