The 2.0 version of rSNPBase

Variant report

Variant rs57424436
Chromosome Location chr6:107033156-107033157
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:106996400-107074000 Weak transcription Fetal Kidney kidney
2 chr6:107010200-107064600 Weak transcription A549 lung
3 chr6:107014400-107038800 Weak transcription Fetal Brain Female brain
4 chr6:107016200-107039400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr6:107017800-107041000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr6:107018000-107052600 Weak transcription Colonic Mucosa Colon
7 chr6:107018400-107066400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr6:107018400-107076400 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr6:107018600-107039000 Weak transcription Placenta Placenta
10 chr6:107018800-107039400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr6:107018800-107076200 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr6:107019000-107076200 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr6:107019200-107034800 Weak transcription GM12878-XiMat blood
14 chr6:107019400-107034400 Weak transcription NHEK skin
15 chr6:107019400-107035200 Weak transcription Fetal Lung lung
16 chr6:107019800-107076400 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr6:107020200-107037600 Weak transcription Fetal Heart heart
18 chr6:107021600-107033400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr6:107022000-107076400 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr6:107023200-107038200 Weak transcription Muscle Satellite Cultured Cells --
21 chr6:107023200-107038600 Weak transcription Brain Germinal Matrix brain
22 chr6:107023400-107033200 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr6:107023400-107034200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr6:107023400-107034200 Weak transcription Right Ventricle heart
25 chr6:107023400-107034400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr6:107023400-107034600 Weak transcription Hela-S3 cervix
27 chr6:107023400-107038200 Weak transcription HSMM muscle
28 chr6:107023400-107038600 Weak transcription NH-A brain
29 chr6:107023400-107039000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr6:107023400-107039600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr6:107023400-107050200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr6:107023400-107068800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr6:107023400-107076600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr6:107023600-107038800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr6:107023800-107034600 Weak transcription Brain Inferior Temporal Lobe brain
36 chr6:107024200-107035200 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr6:107026200-107035000 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr6:107026400-107038800 Weak transcription Brain Anterior Caudate brain
39 chr6:107027600-107038600 Weak transcription NHDF-Ad bronchial
40 chr6:107027800-107033600 Weak transcription Osteobl bone
41 chr6:107028600-107036400 Strong transcription Primary B cells from peripheral blood blood
42 chr6:107029000-107033800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr6:107029000-107034000 Strong transcription Primary T cells from cord blood blood
44 chr6:107029200-107033200 Strong transcription Liver Liver
45 chr6:107029200-107036000 Strong transcription Duodenum Mucosa Duodenum
46 chr6:107029200-107036200 Strong transcription Primary monocytes fromperipheralblood blood
47 chr6:107029200-107036400 Strong transcription Monocytes-CD14+_RO01746 blood
48 chr6:107029400-107033200 Strong transcription Rectal Mucosa Donor 29 rectum
49 chr6:107029400-107035800 Strong transcription Primary B cells from cord blood blood
50 chr6:107029400-107036000 Strong transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015